利用纵向干物质产量随机回归模型评估多年生牧草育种试验基因型适应性和稳定性。

IF 2.2 3区 生物学 Q3 GENETICS & HEREDITY
Claudio Carlos Fernandes Filho, Sanzio Carvalho Lima Barrios, Mateus Figueiredo Santos, Jose Airton Rodrigues Nunes, Cacilda Borges do Valle, Liana Jank, Esteban Fernando Rios
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引用次数: 0

摘要

多年生牧草干物质产量(DMY)的基因型选择是基于随时间的重复测量,即纵向数据。这些数据集捕获了时间趋势和变异性,这对于确定跨季节具有理想性能的基因型至关重要。本研究基于苜蓿(Medicago sativa L.)、豚草(Megathyrsus maximus)和腕足草(Urochloa spp.) 3种多年生植物和10个育种试验的纵向DMY数据,建立了随机回归模型(RRM)选择基因型的方法。提出了基于曲线下面积的适应性估计和基于曲线变异系数的稳定性估计。结果表明,RRM总是将(co)方差结构近似为自回归模式。此外,RRM可以为饲料育种试验提供有用的纵向数据信息,育种者可以通过解释反应规范来选择基于季节性的基因型。因此,我们建议在多年生植物育种试验中采用RRM方法进行纵向性状的研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data.

Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data.

Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data.

Assessing genotype adaptability and stability in perennial forage breeding trials using random regression models for longitudinal dry matter yield data.

Genotype selection for dry matter yield (DMY) in perennial forage species is based on repeated measurements over time, referred to as longitudinal data. These datasets capture temporal trends and variability, which are critical for identifying genotypes with desirable performance across seasons. In this study, we have presented a random regression model (RRM) approach for selecting genotypes based on longitudinal DMY data generated from 10 breeding trials and three perennial species, alfalfa (Medicago sativa L.), guineagrass (Megathyrsus maximus), and brachiaria (Urochloa spp.). We also proposed the estimation of adaptability based on the area under the curve and stability based on the curve coefficient of variation. Our results showed that RRM always approximated the (co)variance structure into an autoregressive pattern. Furthermore, RRM can offer useful information about longitudinal data in forage breeding trials, where the breeder can select genotypes based on their seasonality by interpreting reaction norms. Therefore, we recommend using RRM for longitudinal traits in breeding trials for perennial species.

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来源期刊
G3: Genes|Genomes|Genetics
G3: Genes|Genomes|Genetics GENETICS & HEREDITY-
CiteScore
5.10
自引率
3.80%
发文量
305
审稿时长
3-8 weeks
期刊介绍: G3: Genes, Genomes, Genetics provides a forum for the publication of high‐quality foundational research, particularly research that generates useful genetic and genomic information such as genome maps, single gene studies, genome‐wide association and QTL studies, as well as genome reports, mutant screens, and advances in methods and technology. The Editorial Board of G3 believes that rapid dissemination of these data is the necessary foundation for analysis that leads to mechanistic insights. G3, published by the Genetics Society of America, meets the critical and growing need of the genetics community for rapid review and publication of important results in all areas of genetics. G3 offers the opportunity to publish the puzzling finding or to present unpublished results that may not have been submitted for review and publication due to a perceived lack of a potential high-impact finding. G3 has earned the DOAJ Seal, which is a mark of certification for open access journals, awarded by DOAJ to journals that achieve a high level of openness, adhere to Best Practice and high publishing standards.
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