评估region-naïve机器学习算法在低资源环境中识别癫痫的通用性。

PLOS digital health Pub Date : 2025-02-12 eCollection Date: 2025-02-01 DOI:10.1371/journal.pdig.0000491
Ioana Duta, Symon M Kariuki, Anthony K Ngugi, Angelina Kakooza Mwesige, Honorati Masanja, Daniel M Mwanga, Seth Owusu-Agyei, Ryan Wagner, J Helen Cross, Josemir W Sander, Charles R Newton, Arjune Sen, Gabriel Davis Jones
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引用次数: 0

摘要

目标:大约80%的癫痫患者生活在低收入和中等收入国家,在这些国家,有限的资源和耻辱感阻碍了准确的诊断和治疗。临床机器学习模型在支持低收入和中等收入国家的诊断过程方面已显示出巨大的前景,它有助于在不依赖专业人员或经过培训的人员的情况下对可能的癫痫病例进行初步筛查和检测。然而,这些模型推广到naïve地区的效果如何,尚未得到充分探索。在这里,我们使用一种新的方法来评估这些临床工具的适用性和适用性,以帮助筛查和诊断活动性惊厥癫痫,而不是在他们原来的培训背景。方法:我们从人口统计站点的癫痫流行病学研究数据集中获取数据,该数据集包括撒哈拉以南非洲五个站点的人口统计信息和与癫痫诊断相关的临床变量。对于每个位点,我们开发了一个区域特异性(单位点)癫痫预测模型,并评估了其在其他位点的表现。然后,我们迭代地将站点添加到多站点模型中,并在省略的区域上评估模型的性能。然后比较模型的性能和参数在每个地点的排列。我们使用留一个站点的交叉验证分析来评估将单个站点数据纳入模型的影响。结果:单点临床模型在自己的区域内表现良好,但在其他区域评估时通常较差(结论:中低收入国家癫痫诊断的临床模型表现出ML模型的特征,例如有限的通用性以及内部和外部性能之间的权衡。预测者和模型结果之间的关系也因地点而异,这表明需要在更广泛实施之前用当地数据更新特定的模型方面。差异可能是特定于诊断的文化背景。我们建议开发适合其预期部署的文化和背景的模型,并且在没有经过彻底事先评估的情况下,谨慎地部署区域和culture-naïve模型。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Evaluating the generalisability of region-naïve machine learning algorithms for the identification of epilepsy in low-resource settings.

Objectives: Approximately 80% of people with epilepsy live in low- and middle-income countries (LMICs), where limited resources and stigma hinder accurate diagnosis and treatment. Clinical machine learning models have demonstrated substantial promise in supporting the diagnostic process in LMICs by aiding in preliminary screening and detection of possible epilepsy cases without relying on specialised or trained personnel. How well these models generalise to naïve regions is, however, underexplored. Here, we use a novel approach to assess the suitability and applicability of such clinical tools to aid screening and diagnosis of active convulsive epilepsy in settings beyond their original training contexts.

Methods: We sourced data from the Study of Epidemiology of Epilepsy in Demographic Sites dataset, which includes demographic information and clinical variables related to diagnosing epilepsy across five sub-Saharan African sites. For each site, we developed a region-specific (single-site) predictive model for epilepsy and assessed its performance at other sites. We then iteratively added sites to a multi-site model and evaluated model performance on the omitted regions. Model performances and parameters were then compared across every permutation of sites. We used a leave-one-site-out cross-validation analysis to assess the impact of incorporating individual site data in the model.

Results: Single-site clinical models performed well within their own regions, but generally worse when evaluated in other regions (p<0.05). Model weights and optimal thresholds varied markedly across sites. When the models were trained using data from an increasing number of sites, mean internal performance decreased while external performance improved.

Conclusions: Clinical models for epilepsy diagnosis in LMICs demonstrate characteristic traits of ML models, such as limited generalisability and a trade-off between internal and external performance. The relationship between predictors and model outcomes also varies across sites, suggesting the need to update specific model aspects with local data before broader implementation. Variations are likely to be particular to the cultural context of diagnosis. We recommend developing models adapted to the cultures and contexts of their intended deployment and caution against deploying region- and culture-naïve models without thorough prior evaluation.

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