利用深度强化学习计算罕见事件研究的过渡路径

IF 3.8 2区 物理与天体物理 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Bo Lin, Yangzheng Zhong, Weiqing Ren
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引用次数: 0

摘要

过渡途径在理解动力系统的过渡机制中起着核心作用。对于复杂的高维系统,例如生物分子构象变化的研究,确定过渡途径通常是一项具有挑战性的任务。在这项工作中,我们提出了一种深度强化学习方法来计算过渡路径。该方法采用构型空间中的多边形链对路径进行几何逼近。寻路任务被表述为成本最小化问题,其中的成本函数改编自Freidlin-Wentzell动作函数,以便能够处理粗略的势能景观。在此基础上,引入了一种actor-critic算法,该算法将系统的潜在力纳入到探索策略中,并将系统的物理性质结合到分子系统的神经网络中。所提出的方法与强化学习相结合,为具有粗糙能量景观的系统探索过渡区域和计算全局最优过渡路径提供了一种方法。我们强调了该方法在三个基准问题上的能力,包括扩展的Mueller系统和七个粒子的Lennard-Jones系统。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computing transition pathways for the study of rare events using deep reinforcement learning
The transition pathway plays a central role in understanding the transition mechanism of dynamical systems. Identifying the transition pathway is usually a challenging task for complex and high-dimensional systems, for example, in the study of conformational changes for bio-molecules. In this work, we propose a deep reinforcement learning method for computing the transition pathway. The method employs a geometric approximation of the pathway by polygonal chains in the configuration space. The path-finding task is formulated as a cost minimization problem, where a cost function is adapted from the Freidlin-Wentzell action functional so that it is able to deal with rough potential-energy landscapes. Then the problem is solved by introducing an actor-critic algorithm, which incorporates the potential force of the system in the exploration policy and combines physical properties of the system in the neural networks for molecular systems. The proposed method in conjunction with reinforcement learning provides a way for exploring the transition region and computing the globally optimal transition pathway for systems with rough energy landscapes. We highlight the abilities of the method on three benchmark problems, including an extended Mueller system and a Lennard-Jones system of seven particles.
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来源期刊
Journal of Computational Physics
Journal of Computational Physics 物理-计算机:跨学科应用
CiteScore
7.60
自引率
14.60%
发文量
763
审稿时长
5.8 months
期刊介绍: Journal of Computational Physics thoroughly treats the computational aspects of physical problems, presenting techniques for the numerical solution of mathematical equations arising in all areas of physics. The journal seeks to emphasize methods that cross disciplinary boundaries. The Journal of Computational Physics also publishes short notes of 4 pages or less (including figures, tables, and references but excluding title pages). Letters to the Editor commenting on articles already published in this Journal will also be considered. Neither notes nor letters should have an abstract.
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