基于高效U-net模型的脑胶质瘤MRI图像自动分割

Yessine Amri , Amine Ben Slama , Zouhair Mbarki , Ridha Selmi , Hedi Trabelsi
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引用次数: 0

摘要

胶质瘤是诊断和治疗最具侵袭性和挑战性的脑肿瘤之一。磁共振成像(MRI)对胶质瘤区域的准确分割对于早期诊断和有效的治疗计划至关重要。本研究提出了一种针对胶质瘤分割的优化U-Net模型,解决了边界划分、计算效率和可泛化性等关键挑战。该模型集成了流线型的编码器-解码器路径和优化的跳过连接,在降低计算复杂度的同时实现了精确的分割。该模型在两个数据集上进行了验证:包含110名患者的TCGA-TCIA和多模态BraTS 2021数据集。采用Dice系数、交联(IoU)、豪斯多夫距离(HD)和结构相似指数(SSIM)等指标,与最先进的方法(包括Attention U-Net、Trans-U-Net、DeepLabV3+和3D U-Net)进行比较评估。所提出的U-Net在所有指标上都取得了最高的性能,在TCGA-TCIA数据集上,Dice得分为92.54%,IoU为90.42%,HD为4.12 mm, SSIM为0.962。在BraTS数据集上,它取得了类似的结果,Dice得分为91.32%,IoU为89.56%。而其他方法,如Attention U-Net和DeepLabV3+, Dice得分较低,分别为85.62%和84.10%,HD值较高,表明边界划分较差。此外,所提出的模型显示了计算效率,处理图像的平均时间为1.5秒,而注意力U-Net为5.0秒,跨U-Net为9.0秒。这些结果强调了优化后的U-Net作为一种稳健、准确和高效的神经胶质瘤分割工具的潜力。未来的工作将集中在临床验证和扩展模型,包括自动胶质瘤分级,进一步提高其在医学成像工作流程中的适用性。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Automatic glioma segmentation based on efficient U-net model using MRI images
Gliomas are among the most aggressive and challenging brain tumors to diagnose and treat. Accurate segmentation of glioma regions in Magnetic Resonance Imaging (MRI) is essential for early diagnosis and effective treatment planning. This study proposes an optimized U-Net model tailored for glioma segmentation, addressing key challenges such as boundary delineation, computational efficiency, and generalizability. The proposed model integrates streamlined encoder-decoder pathways and optimized skip connections, achieving precise segmentation while reducing computational complexity. The model was validated on two datasets: TCGA-TCIA, containing 110 patients, and the multi-modal BraTS 2021 dataset. Comparative evaluations were conducted against state-of-the-art methods, including Attention U-Net, Trans-U-Net, DeepLabV3+, and 3D U-Net, using metrics such as Dice Coefficient, Intersection over Union (IoU), Hausdorff Distance (HD), and Structural Similarity Index (SSIM). The proposed U-Net achieved the highest performance across all metrics, with a Dice score of 92.54 %, IoU of 90.42 %, HD of 4.12 mm, and SSIM of 0.962 on the TCGA-TCIA dataset. On the BraTS dataset, it achieved comparable results, with a Dice score of 91.32 % and an IoU of 89.56 %. In contrast, other methods, such as Attention U-Net and DeepLabV3+, showed lower Dice scores of 85.62 % and 84.10 %, respectively, and higher HD values, indicating inferior boundary delineation. Additionally, the proposed model demonstrated computational efficiency, processing images in 1.5 s on average, compared to 5.0 s for Attention U-Net and 9.0 s for Trans-U-Net. These results underscore the potential of the optimized U-Net as a robust, accurate, and efficient tool for glioma segmentation. Future work will focus on clinical validation and extending the model to include automated glioma grading, further enhancing its applicability in medical imaging workflows.
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来源期刊
Intelligence-based medicine
Intelligence-based medicine Health Informatics
CiteScore
5.00
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审稿时长
187 days
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