pyMechOpt:用于优化反应机制的Python工具箱

IF 2.4 4区 计算机科学 Q2 COMPUTER SCIENCE, SOFTWARE ENGINEERING
Sihan Di, Nanjia Yu, Shutao Han, Haodong He
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引用次数: 0

摘要

本文介绍了pyMechOpt,一个用于化学反应机制优化的开源Python包。该软件包实现了一系列优化方法,包括遗传算法(GA)和粒子群优化(PSO)等传统算法,以及引入坐标下降(CD)和多目标优化算法等新方法。通过优化简化的GRI-Mech 3.0甲烷燃烧机制来验证pyMechOpt的能力。SILSCD方法在目标函数上有明显的减少,超过了其他方法的能力。在多目标优化环境下,NSGA-III表现出平衡的Pareto前沿,优于CTAEA和MOEAD。这些结果有助于说明在pyMechOpt中实现的新方法的有效性。该软件包为研究人员提供了一个多功能平台来定制优化算法和目标函数,支持对结果的详细分析。该软件包通过引入创新的优化方法和完善化学反应机制的综合软件工具,为该领域做出了贡献。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
pyMechOpt: A Python toolbox for optimizing of reaction mechanisms
This paper introduces pyMechOpt, an open-source Python package designed for the optimization of chemical reaction mechanisms. The package implements a range of optimization methods, including conventional algorithms such as genetic algorithms (GA) and particle swarm optimization (PSO), as well as introducing novel methods such as coordinate descent (CD) and multi-objective optimization algorithms. The optimization of a reduced GRI-Mech 3.0 mechanism for methane combustion is used to demonstrate the capabilities of pyMechOpt. The SILSCD method demonstrated a notable reduction in the objective functions, exceeding the capabilities of other methods. In the context of multi-objective optimization, NSGA-III demonstrated a balanced Pareto front, outperforming both CTAEA and MOEAD. These results serve to illustrate the efficacy of the novel methods implemented in pyMechOpt. The package provides a versatile platform for researchers to customize optimization algorithms and objective functions, supporting detailed analysis of results. This package makes a contribution to the field by introducing innovative optimization methods and a comprehensive software tool for refining chemical reaction mechanisms.
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来源期刊
SoftwareX
SoftwareX COMPUTER SCIENCE, SOFTWARE ENGINEERING-
CiteScore
5.50
自引率
2.90%
发文量
184
审稿时长
9 weeks
期刊介绍: SoftwareX aims to acknowledge the impact of software on today''s research practice, and on new scientific discoveries in almost all research domains. SoftwareX also aims to stress the importance of the software developers who are, in part, responsible for this impact. To this end, SoftwareX aims to support publication of research software in such a way that: The software is given a stamp of scientific relevance, and provided with a peer-reviewed recognition of scientific impact; The software developers are given the credits they deserve; The software is citable, allowing traditional metrics of scientific excellence to apply; The academic career paths of software developers are supported rather than hindered; The software is publicly available for inspection, validation, and re-use. Above all, SoftwareX aims to inform researchers about software applications, tools and libraries with a (proven) potential to impact the process of scientific discovery in various domains. The journal is multidisciplinary and accepts submissions from within and across subject domains such as those represented within the broad thematic areas below: Mathematical and Physical Sciences; Environmental Sciences; Medical and Biological Sciences; Humanities, Arts and Social Sciences. Originating from these broad thematic areas, the journal also welcomes submissions of software that works in cross cutting thematic areas, such as citizen science, cybersecurity, digital economy, energy, global resource stewardship, health and wellbeing, etcetera. SoftwareX specifically aims to accept submissions representing domain-independent software that may impact more than one research domain.
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