生物系统时空精度的微观起源。

IF 2.4 Q3 BIOPHYSICS
Biophysical reports Pub Date : 2025-03-12 Epub Date: 2025-01-28 DOI:10.1016/j.bpr.2025.100197
Anupam Mondal, Anatoly B Kolomeisky
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引用次数: 0

摘要

所有的生命系统都表现出显著的空间和时间精度,尽管它们在本质上是波动的环境中运行。更令人惊讶的是,生物现象是由多种化学反应调控的,而这些化学反应也是随机的。虽然生物学中令人惊讶的高精度的潜在分子机制仍未得到很好的理解,但最近提出了一种依赖于相关随机过程耦合的新的理论图景,并应用于解释不同的现象。为了说明这种方法,在这篇综述中,我们讨论了两个表现出精确控制的系统:细菌细胞大小的空间调节和λ噬菌体细胞裂解时间的时间调节。在细胞大小调节中,人们认为随机细胞生长和细胞分裂过程之间的平衡导致细胞大小的狭窄分布。在细胞裂解过程中,精确的时间是由于holin蛋白积累和细胞膜破裂的耦合作用。随机耦合框架还允许明确地评估两种生物系统的动态特性,消除了利用阈值的现象学概念的需要。观察到与实验结果非常吻合,支持了所提出的理论观点。这些观察结果还表明,随机耦合方法捕获了精确细胞调节的分子机制的重要方面,为复杂生物现象的更高级研究提供了强大的新工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Microscopic origin of the spatial and temporal precision in biological systems.

All living systems display remarkable spatial and temporal precision, despite operating in intrinsically fluctuating environments. It is even more surprising given that biological phenomena are regulated by multiple chemical reactions that are also random. Although the underlying molecular mechanisms of surprisingly high precision in biology remain not well understood, a novel theoretical picture that relies on the coupling of relevant stochastic processes has recently been proposed and applied to explain different phenomena. To illustrate this approach, in this review, we discuss two systems that exhibit precision control: spatial regulation in bacterial cell size and temporal regulation in the timing of cell lysis by λ bacteriophage. In cell-size regulation, it is argued that a balance between stochastic cell growth and cell division processes leads to a narrow distribution of cell sizes. In cell lysis, it is shown that precise timing is due to the coupling of holin protein accumulation and the breakage of the cellular membrane. The stochastic coupling framework also allows us to explicitly evaluate dynamic properties for both biological systems, eliminating the need to utilize the phenomenological concept of thresholds. Excellent agreement with experimental observations is observed, supporting the proposed theoretical ideas. These observations also suggest that the stochastic coupling method captures the important aspects of molecular mechanisms of precise cellular regulation, providing a powerful new tool for more advanced investigations of complex biological phenomena.

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来源期刊
Biophysical reports
Biophysical reports Biophysics
CiteScore
2.40
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