{"title":"研究真菌生物膜的一种新颖可靠的方法。","authors":"Biswambhar Biswas, Shumaiza Asif, Rekha Puria, Anil Thakur","doi":"10.21769/BioProtoc.5146","DOIUrl":null,"url":null,"abstract":"<p><p><i>Candida auris</i>, labeled an urgent threat by the CDC, shows significant resilience to treatments and disinfectants via biofilm formation, complicating treatment/disease management. The inconsistencies in biofilm architecture observed across studies hinder the understanding of its role in pathogenesis. Our novel in vitro technique cultivates <i>C. auris</i> biofilms on gelatin-coated coverslips, reliably producing multilayer biofilms with extracellular polymeric substances (EPS). This method, applicable to other <i>Candida</i> species like <i>C. glabrata</i> and <i>C. albicans</i>, is cost-effective and mimics the niche of biofilm formation. It is suitable for high-throughput drug screening and repurposing efforts, aiding in the development of new therapeutics. Our technique represents a significant advancement in <i>Candida</i> biofilm research, addressing the need for consistent, reproducible biofilm models. We detail a step-by-step procedure for creating a substratum for biofilm growth and measuring biofilm thickness using confocal laser scanning microscopy (CLSM) and ultrastructure by scanning electron microscopy (SEM). This method provides consistent outcomes across various <i>Candida</i> species. Key features • The biofilm formed on gelatin surfaces mimics host conditions, replicating the multilayered structure and EPS, offering a more accurate model for studying <i>C. auris</i> biofilms. • This method is highly reproducible and suitable for drug screening and biofilm analysis through three-dimensional (3D) reconstruction. • This in vitro technique aids in studying biofilm formation, related virulence properties, and drug tolerance of <i>C. auris</i> and other <i>Candida</i> species. • The simple, cost-effective technique is ideal for screening novel inhibitors and repurposed drug libraries, facilitating the design/identification of new therapeutics against <i>Candida</i> species.</p>","PeriodicalId":93907,"journal":{"name":"Bio-protocol","volume":"15 1","pages":"e5146"},"PeriodicalIF":1.0000,"publicationDate":"2025-01-05","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11717715/pdf/","citationCount":"0","resultStr":"{\"title\":\"A Novel and Robust Method for Investigating Fungal Biofilm.\",\"authors\":\"Biswambhar Biswas, Shumaiza Asif, Rekha Puria, Anil Thakur\",\"doi\":\"10.21769/BioProtoc.5146\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p><i>Candida auris</i>, labeled an urgent threat by the CDC, shows significant resilience to treatments and disinfectants via biofilm formation, complicating treatment/disease management. The inconsistencies in biofilm architecture observed across studies hinder the understanding of its role in pathogenesis. Our novel in vitro technique cultivates <i>C. auris</i> biofilms on gelatin-coated coverslips, reliably producing multilayer biofilms with extracellular polymeric substances (EPS). This method, applicable to other <i>Candida</i> species like <i>C. glabrata</i> and <i>C. albicans</i>, is cost-effective and mimics the niche of biofilm formation. It is suitable for high-throughput drug screening and repurposing efforts, aiding in the development of new therapeutics. Our technique represents a significant advancement in <i>Candida</i> biofilm research, addressing the need for consistent, reproducible biofilm models. We detail a step-by-step procedure for creating a substratum for biofilm growth and measuring biofilm thickness using confocal laser scanning microscopy (CLSM) and ultrastructure by scanning electron microscopy (SEM). This method provides consistent outcomes across various <i>Candida</i> species. Key features • The biofilm formed on gelatin surfaces mimics host conditions, replicating the multilayered structure and EPS, offering a more accurate model for studying <i>C. auris</i> biofilms. • This method is highly reproducible and suitable for drug screening and biofilm analysis through three-dimensional (3D) reconstruction. • This in vitro technique aids in studying biofilm formation, related virulence properties, and drug tolerance of <i>C. auris</i> and other <i>Candida</i> species. • The simple, cost-effective technique is ideal for screening novel inhibitors and repurposed drug libraries, facilitating the design/identification of new therapeutics against <i>Candida</i> species.</p>\",\"PeriodicalId\":93907,\"journal\":{\"name\":\"Bio-protocol\",\"volume\":\"15 1\",\"pages\":\"e5146\"},\"PeriodicalIF\":1.0000,\"publicationDate\":\"2025-01-05\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11717715/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Bio-protocol\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.21769/BioProtoc.5146\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Bio-protocol","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.21769/BioProtoc.5146","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
被美国疾病预防控制中心列为紧急威胁的白色念珠菌通过生物膜的形成对治疗和消毒剂表现出明显的抵抗力,使治疗/疾病管理变得更加复杂。不同研究观察到的生物膜结构不一致,妨碍了对其在致病过程中作用的了解。我们的新型体外技术可在明胶包被的盖玻片上培养 C. auris 生物膜,从而可靠地产生含有胞外聚合物(EPS)的多层生物膜。这种方法适用于其他念珠菌物种,如白色念珠菌和白色念珠菌,成本效益高,能模拟生物膜形成的生态位。它适用于高通量药物筛选和再利用工作,有助于新疗法的开发。我们的技术代表了念珠菌生物膜研究的一大进步,满足了对一致的、可重复的生物膜模型的需求。我们详细介绍了创建生物膜生长基质、使用激光共聚焦扫描显微镜(CLSM)测量生物膜厚度以及使用扫描电子显微镜(SEM)测量超微结构的分步步骤。该方法可为各种念珠菌提供一致的结果。主要特点 - 在明胶表面形成的生物膜模拟宿主条件,复制了多层结构和 EPS,为研究念珠菌生物膜提供了更精确的模型。- 这种方法具有高度的可重复性,适合通过三维(3D)重建进行药物筛选和生物膜分析。- 这种体外技术有助于研究脓念珠菌和其他念珠菌的生物膜形成、相关毒力特性和耐药性。- 该技术简单、成本效益高,是筛选新型抑制剂和再利用药物库的理想选择,有助于设计/鉴定针对念珠菌的新疗法。
A Novel and Robust Method for Investigating Fungal Biofilm.
Candida auris, labeled an urgent threat by the CDC, shows significant resilience to treatments and disinfectants via biofilm formation, complicating treatment/disease management. The inconsistencies in biofilm architecture observed across studies hinder the understanding of its role in pathogenesis. Our novel in vitro technique cultivates C. auris biofilms on gelatin-coated coverslips, reliably producing multilayer biofilms with extracellular polymeric substances (EPS). This method, applicable to other Candida species like C. glabrata and C. albicans, is cost-effective and mimics the niche of biofilm formation. It is suitable for high-throughput drug screening and repurposing efforts, aiding in the development of new therapeutics. Our technique represents a significant advancement in Candida biofilm research, addressing the need for consistent, reproducible biofilm models. We detail a step-by-step procedure for creating a substratum for biofilm growth and measuring biofilm thickness using confocal laser scanning microscopy (CLSM) and ultrastructure by scanning electron microscopy (SEM). This method provides consistent outcomes across various Candida species. Key features • The biofilm formed on gelatin surfaces mimics host conditions, replicating the multilayered structure and EPS, offering a more accurate model for studying C. auris biofilms. • This method is highly reproducible and suitable for drug screening and biofilm analysis through three-dimensional (3D) reconstruction. • This in vitro technique aids in studying biofilm formation, related virulence properties, and drug tolerance of C. auris and other Candida species. • The simple, cost-effective technique is ideal for screening novel inhibitors and repurposed drug libraries, facilitating the design/identification of new therapeutics against Candida species.