基于核学习的心衰患者生存参数建模。

IF 3.9 3区 医学 Q1 HEALTH CARE SCIENCES & SERVICES
Maryam Montaseri, Mansour Rezaei, Armin Khayati, Shayan Mostafaei, Mohammad Taheri
{"title":"基于核学习的心衰患者生存参数建模。","authors":"Maryam Montaseri, Mansour Rezaei, Armin Khayati, Shayan Mostafaei, Mohammad Taheri","doi":"10.1186/s12874-024-02455-4","DOIUrl":null,"url":null,"abstract":"<p><p>Time-to-event data are very common in medical applications. Regression models have been developed on such data especially in the field of survival analysis. Kernels are used to handle even more complicated and enormous quantities of medical data by injecting non-linearity into linear models. In this study, a Multiple Kernel Learning (MKL) method has been proposed to optimize survival outcomes under the Accelerated Failure Time (AFT) model, a useful alternative to the Proportional Hazards (PH) frailty model. In other words, a survival parametric regression framework has been presented for clinical data to effectively integrate kernel learning with AFT model using a gradient descent optimization strategy. This methodology involves applying four different parametric models, evaluated using 19 distinct kernels to extract the best fitting scenario. This culminated in a sophisticated strategy that combined these kernels through MKL. We conducted a comparison between the Frailty model and MKL due to their shared fundamental properties. The models were assessed using the Concordance index (C-index) and Brier score (B-score). Each model was tested on both a case study and a replicated/independent dataset. The outcomes showed that kernelization enhances the performance of the model, especially by combining selected kernels for MKL.</p>","PeriodicalId":9114,"journal":{"name":"BMC Medical Research Methodology","volume":"25 1","pages":"7"},"PeriodicalIF":3.9000,"publicationDate":"2025-01-11","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11724484/pdf/","citationCount":"0","resultStr":"{\"title\":\"Survival parametric modeling for patients with heart failure based on Kernel learning.\",\"authors\":\"Maryam Montaseri, Mansour Rezaei, Armin Khayati, Shayan Mostafaei, Mohammad Taheri\",\"doi\":\"10.1186/s12874-024-02455-4\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Time-to-event data are very common in medical applications. Regression models have been developed on such data especially in the field of survival analysis. Kernels are used to handle even more complicated and enormous quantities of medical data by injecting non-linearity into linear models. In this study, a Multiple Kernel Learning (MKL) method has been proposed to optimize survival outcomes under the Accelerated Failure Time (AFT) model, a useful alternative to the Proportional Hazards (PH) frailty model. In other words, a survival parametric regression framework has been presented for clinical data to effectively integrate kernel learning with AFT model using a gradient descent optimization strategy. This methodology involves applying four different parametric models, evaluated using 19 distinct kernels to extract the best fitting scenario. This culminated in a sophisticated strategy that combined these kernels through MKL. We conducted a comparison between the Frailty model and MKL due to their shared fundamental properties. The models were assessed using the Concordance index (C-index) and Brier score (B-score). Each model was tested on both a case study and a replicated/independent dataset. The outcomes showed that kernelization enhances the performance of the model, especially by combining selected kernels for MKL.</p>\",\"PeriodicalId\":9114,\"journal\":{\"name\":\"BMC Medical Research Methodology\",\"volume\":\"25 1\",\"pages\":\"7\"},\"PeriodicalIF\":3.9000,\"publicationDate\":\"2025-01-11\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11724484/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"BMC Medical Research Methodology\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://doi.org/10.1186/s12874-024-02455-4\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"HEALTH CARE SCIENCES & SERVICES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"BMC Medical Research Methodology","FirstCategoryId":"3","ListUrlMain":"https://doi.org/10.1186/s12874-024-02455-4","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"HEALTH CARE SCIENCES & SERVICES","Score":null,"Total":0}
引用次数: 0

摘要

时间到事件数据在医疗应用中非常常见。针对这些数据,特别是在生存分析领域,已经建立了回归模型。通过将非线性注入线性模型,核函数被用于处理更复杂和大量的医疗数据。在这项研究中,提出了一种多核学习(MKL)方法来优化加速失效时间(AFT)模型下的生存结果,AFT是比例风险(PH)脆弱性模型的一个有用替代方案。换句话说,针对临床数据提出了一个生存参数回归框架,使用梯度下降优化策略有效地将核学习与AFT模型相结合。该方法包括应用四种不同的参数模型,使用19个不同的核进行评估,以提取最佳拟合场景。最终形成了一个复杂的策略,通过MKL将这些内核组合在一起。由于脆弱模型和MKL具有相同的基本性质,我们对它们进行了比较。采用一致性指数(C-index)和Brier评分(B-score)对模型进行评估。每个模型都在一个案例研究和一个复制/独立数据集上进行了测试。结果表明,核化提高了模型的性能,特别是通过将选择的核结合到MKL中。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Survival parametric modeling for patients with heart failure based on Kernel learning.

Time-to-event data are very common in medical applications. Regression models have been developed on such data especially in the field of survival analysis. Kernels are used to handle even more complicated and enormous quantities of medical data by injecting non-linearity into linear models. In this study, a Multiple Kernel Learning (MKL) method has been proposed to optimize survival outcomes under the Accelerated Failure Time (AFT) model, a useful alternative to the Proportional Hazards (PH) frailty model. In other words, a survival parametric regression framework has been presented for clinical data to effectively integrate kernel learning with AFT model using a gradient descent optimization strategy. This methodology involves applying four different parametric models, evaluated using 19 distinct kernels to extract the best fitting scenario. This culminated in a sophisticated strategy that combined these kernels through MKL. We conducted a comparison between the Frailty model and MKL due to their shared fundamental properties. The models were assessed using the Concordance index (C-index) and Brier score (B-score). Each model was tested on both a case study and a replicated/independent dataset. The outcomes showed that kernelization enhances the performance of the model, especially by combining selected kernels for MKL.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
BMC Medical Research Methodology
BMC Medical Research Methodology 医学-卫生保健
CiteScore
6.50
自引率
2.50%
发文量
298
审稿时长
3-8 weeks
期刊介绍: BMC Medical Research Methodology is an open access journal publishing original peer-reviewed research articles in methodological approaches to healthcare research. Articles on the methodology of epidemiological research, clinical trials and meta-analysis/systematic review are particularly encouraged, as are empirical studies of the associations between choice of methodology and study outcomes. BMC Medical Research Methodology does not aim to publish articles describing scientific methods or techniques: these should be directed to the BMC journal covering the relevant biomedical subject area.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信