精确肿瘤学的多模态深度学习方法:综合综述。

IF 6.8 2区 生物学 Q1 BIOCHEMICAL RESEARCH METHODS
Huan Yang, Minglei Yang, Jiani Chen, Guocong Yao, Quan Zou, Linpei Jia
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引用次数: 0

摘要

肿瘤领域大规模生物医学数据的迅速积累,以及深度学习(DL)技术的重大进步,使多模态深度学习(MDL)成为精准肿瘤学的基石。本文在大量文献综述的基础上,对MDL在该领域的应用进行了综述。共收录了2024年9月之前发表的651篇文章。我们首先概述支持癌症研究的公开可用的多模态数据集。然后,我们讨论了关键的深度学习训练方法、数据表示技术以及集成多模态数据的融合策略。本综述还探讨了MDL在肿瘤分割、检测、诊断、预后、治疗选择和治疗反应监测等方面的应用。最后,我们批判性地评估了当前方法的局限性,并提出了未来研究的方向。通过综合目前的进展和识别挑战,本综述旨在指导利用MDL推进精准肿瘤学的未来努力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Multimodal deep learning approaches for precision oncology: a comprehensive review.

The burgeoning accumulation of large-scale biomedical data in oncology, alongside significant strides in deep learning (DL) technologies, has established multimodal DL (MDL) as a cornerstone of precision oncology. This review provides an overview of MDL applications in this field, based on an extensive literature survey. In total, 651 articles published before September 2024 are included. We first outline publicly available multimodal datasets that support cancer research. Then, we discuss key DL training methods, data representation techniques, and fusion strategies for integrating multimodal data. The review also examines MDL applications in tumor segmentation, detection, diagnosis, prognosis, treatment selection, and therapy response monitoring. Finally, we critically assess the limitations of current approaches and propose directions for future research. By synthesizing current progress and identifying challenges, this review aims to guide future efforts in leveraging MDL to advance precision oncology.

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来源期刊
Briefings in bioinformatics
Briefings in bioinformatics 生物-生化研究方法
CiteScore
13.20
自引率
13.70%
发文量
549
审稿时长
6 months
期刊介绍: Briefings in Bioinformatics is an international journal serving as a platform for researchers and educators in the life sciences. It also appeals to mathematicians, statisticians, and computer scientists applying their expertise to biological challenges. The journal focuses on reviews tailored for users of databases and analytical tools in contemporary genetics, molecular and systems biology. It stands out by offering practical assistance and guidance to non-specialists in computerized methodologies. Covering a wide range from introductory concepts to specific protocols and analyses, the papers address bacterial, plant, fungal, animal, and human data. The journal's detailed subject areas include genetic studies of phenotypes and genotypes, mapping, DNA sequencing, expression profiling, gene expression studies, microarrays, alignment methods, protein profiles and HMMs, lipids, metabolic and signaling pathways, structure determination and function prediction, phylogenetic studies, and education and training.
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