线粒体控制区序列显示,来自马来西亚半岛东海岸的褐条鲷Lutjanus vitta (Quoy and Gaimard, 1824)具有高度的遗传连通性。

IF 2.9 4区 生物学 Q1 EDUCATION & EDUCATIONAL RESEARCH
Journal of Genetics Pub Date : 2024-01-01
Ahasan Habib, Nor Athirah Husna Ahmad, Nur Asma Ariffin, Ying Giat Seah, M M Mahbub Alam, Tun Nurul Aimi Mat Jaafar, Nur Fadli, Siti Azizah Mohd Nor, Md Moshiur Rahman
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引用次数: 0

摘要

褐条鲷,Lutjanus vitta (Quoy and Gaimard, 1824)是马来西亚广泛捕获的重要商业鲷鱼。基于mtDNA控制区序列的817 bp区域,我们研究了马来西亚半岛东海岸L. vitta的遗传多样性、种群连通性和历史人口统计学。最大似然基因树表明,所研究的群体结构有限,形成了一个单一的泛群,缺乏内部进化支的支持。AMOVA和群体配对ΦST值表明研究区之间存在较高的遗传交换。单倍型多样性较高(0.956 ~ 1.000),核苷酸多样性较低(0.008 ~ 0.014),表明维塔草居群近期有扩张。然而,中立性和拟合优度检验均显示不显著值。这些数据反映了最近的人口扩张,贝叶斯天际线图估计人口扩张为44kaya。遗传分化的缺乏可归因于产卵模式、卵和浮游幼虫的扩散以及缺乏物理障碍,这是其他Lutjanus物种的典型特征。目前的发现可以为马来西亚和其他邻近国家共享同一水道的L. vitta提供有效的管理策略。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Mitochondrial control region sequences show high genetic connectivity in the brownstripe snapper, Lutjanus vitta (Quoy and Gaimard, 1824) from the east coast of Peninsular Malaysia.

The Brownstripe Snapper, Lutjanus vitta (Quoy and Gaimard, 1824) is a commercially important snapper extensively caught in Malaysia. We examined genetic diversity, population connectivity, and historical demographics of the L. vitta, off the eastern coast of peninsular Malaysia based on an 817 bp region of the mtDNA control region sequences. Maximum likelihood gene trees demonstrated that the populations under study had limited structuring and formed a single panmictic population that lacks support for internal clades. AMOVA and population pairwise ΦST values indicated high genetic exchange between the study areas. A high level of haplotype diversity (0.956-1.000) with low nucleotide diversity (0.008-0.014) indicates a recent expansion of L. vitta populations. However, both neutrality and goodness of fit tests revealed nonsignificant values. These data reflect a recent demographic expansion, which the Bayesian skyline plot estimates population expansion at 44 Kya. The absence of genetic differentiation can be attributed to spawning patterns, dispersal of egg and planktonic larvae, and the absence of physical barriers, which are typical of other Lutjanus species. The current findings could initiate efficient management strategies for L. vitta along Malaysia and other nearby nations that share the same waterways.

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来源期刊
Journal of Genetics
Journal of Genetics 生物-遗传学
CiteScore
3.10
自引率
0.00%
发文量
72
审稿时长
1 months
期刊介绍: The journal retains its traditional interest in evolutionary research that is of relevance to geneticists, even if this is not explicitly genetical in nature. The journal covers all areas of genetics and evolution,including molecular genetics and molecular evolution.It publishes papers and review articles on current topics, commentaries and essayson ideas and trends in genetics and evolutionary biology, historical developments, debates and book reviews. From 2010 onwards, the journal has published a special category of papers termed ‘Online Resources’. These are brief reports on the development and the routine use of molecular markers for assessing genetic variability within and among species. Also published are reports outlining pedagogical approaches in genetics teaching.
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