Yu Li , Xueqin Sun , Sukai Wang , Lina Guo , Yingwei Qin , Jinxiao Pan , Ping Chen
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To address this issue, we introduce frequency domain information into the popular projection-image domain reconstruction, proposing a Tri-Domain sparse-view CT reconstruction model based on Sparse Transformer (TD-STrans).</div></div><div><h3>Methods</h3><div>TD-STrans integrates three essential modules: the projection recovery module completes the sparse-view projection, the Fourier domain filling module mitigates artifacts and over-smoothing by filling in missing high-frequency details; the image refinement module further enhances and preserves image details. Additionally, a multi-domain joint loss function is designed to simultaneously enhance the reconstruction quality in the projection domain, image domain, and frequency domain, thereby further improving the preservation of image details.</div></div><div><h3>Results</h3><div>The results of simulation experiments on the lymph node dataset and real experiments on the walnut dataset consistently demonstrate the effectiveness of TD-STrans in artifact removal, suppression of over-smoothing, and preservation of structural fidelity.</div></div><div><h3>Conclusion</h3><div>The reconstruction results of TD-STrans indicate that sparse transformer across multiple domains can alleviate over-smoothing and detail loss caused by reduced views, offering a novel solution for ultra-sparse-view CT imaging.</div></div>","PeriodicalId":10624,"journal":{"name":"Computer methods and programs in biomedicine","volume":"260 ","pages":"Article 108575"},"PeriodicalIF":4.9000,"publicationDate":"2024-12-25","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"TD-STrans: Tri-domain sparse-view CT reconstruction based on sparse transformer\",\"authors\":\"Yu Li , Xueqin Sun , Sukai Wang , Lina Guo , Yingwei Qin , Jinxiao Pan , Ping Chen\",\"doi\":\"10.1016/j.cmpb.2024.108575\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><h3>Background and objective</h3><div>Sparse-view computed tomography (CT) speeds up scanning and reduces radiation exposure in medical diagnosis. However, when the projection views are severely under-sampled, deep learning-based reconstruction methods often suffer from over-smoothing of the reconstructed images due to the lack of high-frequency information. To address this issue, we introduce frequency domain information into the popular projection-image domain reconstruction, proposing a Tri-Domain sparse-view CT reconstruction model based on Sparse Transformer (TD-STrans).</div></div><div><h3>Methods</h3><div>TD-STrans integrates three essential modules: the projection recovery module completes the sparse-view projection, the Fourier domain filling module mitigates artifacts and over-smoothing by filling in missing high-frequency details; the image refinement module further enhances and preserves image details. Additionally, a multi-domain joint loss function is designed to simultaneously enhance the reconstruction quality in the projection domain, image domain, and frequency domain, thereby further improving the preservation of image details.</div></div><div><h3>Results</h3><div>The results of simulation experiments on the lymph node dataset and real experiments on the walnut dataset consistently demonstrate the effectiveness of TD-STrans in artifact removal, suppression of over-smoothing, and preservation of structural fidelity.</div></div><div><h3>Conclusion</h3><div>The reconstruction results of TD-STrans indicate that sparse transformer across multiple domains can alleviate over-smoothing and detail loss caused by reduced views, offering a novel solution for ultra-sparse-view CT imaging.</div></div>\",\"PeriodicalId\":10624,\"journal\":{\"name\":\"Computer methods and programs in biomedicine\",\"volume\":\"260 \",\"pages\":\"Article 108575\"},\"PeriodicalIF\":4.9000,\"publicationDate\":\"2024-12-25\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computer methods and programs in biomedicine\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0169260724005686\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computer methods and programs in biomedicine","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0169260724005686","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS","Score":null,"Total":0}
TD-STrans: Tri-domain sparse-view CT reconstruction based on sparse transformer
Background and objective
Sparse-view computed tomography (CT) speeds up scanning and reduces radiation exposure in medical diagnosis. However, when the projection views are severely under-sampled, deep learning-based reconstruction methods often suffer from over-smoothing of the reconstructed images due to the lack of high-frequency information. To address this issue, we introduce frequency domain information into the popular projection-image domain reconstruction, proposing a Tri-Domain sparse-view CT reconstruction model based on Sparse Transformer (TD-STrans).
Methods
TD-STrans integrates three essential modules: the projection recovery module completes the sparse-view projection, the Fourier domain filling module mitigates artifacts and over-smoothing by filling in missing high-frequency details; the image refinement module further enhances and preserves image details. Additionally, a multi-domain joint loss function is designed to simultaneously enhance the reconstruction quality in the projection domain, image domain, and frequency domain, thereby further improving the preservation of image details.
Results
The results of simulation experiments on the lymph node dataset and real experiments on the walnut dataset consistently demonstrate the effectiveness of TD-STrans in artifact removal, suppression of over-smoothing, and preservation of structural fidelity.
Conclusion
The reconstruction results of TD-STrans indicate that sparse transformer across multiple domains can alleviate over-smoothing and detail loss caused by reduced views, offering a novel solution for ultra-sparse-view CT imaging.
期刊介绍:
To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine.
Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.