新型反式二苯乙烯衍生物的设计:寨卡病毒在宿主细胞中的进入屏障。

IF 2.7 4区 生物学 Q2 BIOCHEMICAL RESEARCH METHODS
Pawan , Sonia Devi
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引用次数: 0

摘要

世界上有大量人口生活在热带和亚热带地区,寨卡病毒感染的风险很高,导致全球卫生紧急情况,需要广泛研究以创造有效的抗病毒药物。在此,我们设计了一种新的衍生的反式二苯乙烯分子,通过分子对接方法研究Zika病毒进入宿主细胞的抑制作用。用FTIR、1H NMR、13C NMR、紫外可见光谱和质谱等分析技术对合成的化合物进行了表征。此外,通过x射线晶体学和DFT分析实现了完整的结构解析。本文通过阐述寨卡病毒包膜(E)蛋白的结构和功能,阐述了寨卡病毒的生命周期、基因组及其进入抑制机制。对接研究表明,新合成的二苯乙烯化合物对寨卡病毒进入宿主细胞具有良好的抑制作用,计算的对接评分及其与寨卡病毒e蛋白的结合构象支持了这一结果。此外,利用正常模式分析(NMA)模拟技术预测了目标e蛋白的构象状态,这解释了该化合物与寨卡病毒e蛋白结合的能力。我们希望本研究能够帮助和鼓励药物化学领域的研究人员开发针对寨卡病毒的潜在药物。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Designing of new trans-stilbene derivative: An entry barrier of Zika virus in host cell

Designing of new trans-stilbene derivative: An entry barrier of Zika virus in host cell
A large population in the world lives in tropical and subtropical regions, showing a high risk of Zika viral infection which leads to a situation of global health emergency and demands extensive research to create effective antiviral medicines. Herein, we introduce the design of a new derivatized trans-stilbene molecule to investigate the inhibition of Zika virus entry into the host cell by molecular docking approach. The synthesized compound has been characterized by different analytical techniques such as FTIR, 1H NMR,13C NMR and UV–visible spectroscopy as well as Mass spectrometry (MS). Moreover, the complete structure elucidation was achieved via X-ray crystallography and DFT analysis. The article describes the life cycle and genome of the Zika virus along with its mechanism of entry inhibition by illustrating the structure and function of the ZIKV envelop (E) protein. The docking studies disclosed that the newly synthesized stilbene compound confers an excellent inhibitory response towards the entry of Zika virus in host cells as supported by calculated docking score and its binding conformation with Zika virus E-protein. Further, the normal mode analysis (NMA) simulation technique is used to predict the conformational states of the target E-protein, which explains the potency of the compound to bind with the Zika virus E-protein. We hope that the present study will help and encourage researchers in the field of medicinal chemistry to develop potential drugs against the Zika virus.
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来源期刊
Journal of molecular graphics & modelling
Journal of molecular graphics & modelling 生物-计算机:跨学科应用
CiteScore
5.50
自引率
6.90%
发文量
216
审稿时长
35 days
期刊介绍: The Journal of Molecular Graphics and Modelling is devoted to the publication of papers on the uses of computers in theoretical investigations of molecular structure, function, interaction, and design. The scope of the journal includes all aspects of molecular modeling and computational chemistry, including, for instance, the study of molecular shape and properties, molecular simulations, protein and polymer engineering, drug design, materials design, structure-activity and structure-property relationships, database mining, and compound library design. As a primary research journal, JMGM seeks to bring new knowledge to the attention of our readers. As such, submissions to the journal need to not only report results, but must draw conclusions and explore implications of the work presented. Authors are strongly encouraged to bear this in mind when preparing manuscripts. Routine applications of standard modelling approaches, providing only very limited new scientific insight, will not meet our criteria for publication. Reproducibility of reported calculations is an important issue. Wherever possible, we urge authors to enhance their papers with Supplementary Data, for example, in QSAR studies machine-readable versions of molecular datasets or in the development of new force-field parameters versions of the topology and force field parameter files. Routine applications of existing methods that do not lead to genuinely new insight will not be considered.
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