神经图像翻译的生成对抗网络。

IF 1.4 4区 生物学 Q4 BIOCHEMICAL RESEARCH METHODS
Cassandra Czobit, Reza Samavi
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引用次数: 0

摘要

图像到图像的翻译是将图像从一个域转换到另一个域的一种方法,在医学领域得到了广泛的应用。通过域变换的医学图像合成在增强图像数据集的能力方面是有利的,其中给定类别的图像是有限的。从学习的角度来看,这个过程从本质上拓宽了模型对更多样化的视觉数据的接触,使其能够学习更多的广义特征,从而有助于模型面向数据的鲁棒性。在生成额外神经图像的情况下,获得无法识别的医疗数据和增加较小的注释数据集是有利的。本研究提出了一种循环一致生成对抗网络(CycleGAN)模型,用于将神经图像从一种场强转换为另一种场强(例如,3特斯拉[T]到1.5 T)。该模型与基于深度卷积GAN模型架构的模型进行了比较。CycleGAN能够以合理的精度生成合成和重建的图像。从源域(3 T)到目标域(1.5 T)的映射函数表现最佳,平均峰值信噪比值为25.69±2.49 dB,平均绝对误差值为2106.27±1218.37。本研究的代码已在以下GitHub存储库中公开提供。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Generative Adversarial Networks for Neuroimage Translation.

Image-to-image translation has gained popularity in the medical field to transform images from one domain to another. Medical image synthesis via domain transformation is advantageous in its ability to augment an image dataset where images for a given class are limited. From the learning perspective, this process contributes to the data-oriented robustness of the model by inherently broadening the model's exposure to more diverse visual data and enabling it to learn more generalized features. In the case of generating additional neuroimages, it is advantageous to obtain unidentifiable medical data and augment smaller annotated datasets. This study proposes the development of a cycle-consistent generative adversarial network (CycleGAN) model for translating neuroimages from one field strength to another (e.g., 3 Tesla [T] to 1.5 T). This model was compared with a model based on a deep convolutional GAN model architecture. CycleGAN was able to generate the synthetic and reconstructed images with reasonable accuracy. The mapping function from the source (3 T) to the target domain (1.5 T) performed optimally with an average peak signal-to-noise ratio value of 25.69 ± 2.49 dB and a mean absolute error value of 2106.27 ± 1218.37. The codes for this study have been made publicly available in the following GitHub repository.a.

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来源期刊
Journal of Computational Biology
Journal of Computational Biology 生物-计算机:跨学科应用
CiteScore
3.60
自引率
5.90%
发文量
113
审稿时长
6-12 weeks
期刊介绍: Journal of Computational Biology is the leading peer-reviewed journal in computational biology and bioinformatics, publishing in-depth statistical, mathematical, and computational analysis of methods, as well as their practical impact. Available only online, this is an essential journal for scientists and students who want to keep abreast of developments in bioinformatics. Journal of Computational Biology coverage includes: -Genomics -Mathematical modeling and simulation -Distributed and parallel biological computing -Designing biological databases -Pattern matching and pattern detection -Linking disparate databases and data -New tools for computational biology -Relational and object-oriented database technology for bioinformatics -Biological expert system design and use -Reasoning by analogy, hypothesis formation, and testing by machine -Management of biological databases
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