PBMCs中的差异基因表达:肺结核增加肺癌风险的机制。

IF 2.6 3区 生物学 Q2 GENETICS & HEREDITY
Gene Pub Date : 2025-03-10 Epub Date: 2024-12-26 DOI:10.1016/j.gene.2024.149199
Jie Wu, Yang Chen, Xiaoqi Yang, Huabing Kuang, Ting Feng, Chengmin Deng, Xiaoqian Li, Meng Ye, Xin Tan, Ling Gong, Ya Wang, Yuguang Shen, Jingqiu Qu, Kaifeng Wu
{"title":"PBMCs中的差异基因表达:肺结核增加肺癌风险的机制。","authors":"Jie Wu, Yang Chen, Xiaoqi Yang, Huabing Kuang, Ting Feng, Chengmin Deng, Xiaoqian Li, Meng Ye, Xin Tan, Ling Gong, Ya Wang, Yuguang Shen, Jingqiu Qu, Kaifeng Wu","doi":"10.1016/j.gene.2024.149199","DOIUrl":null,"url":null,"abstract":"<p><p>Pre-existing of pulmonary tuberculosis (PTB) poses increased lung cancer risk, yet the molecular mechanisms remain inadequately understood. This study sought to elucidate the potential mechanisms by performing comprehensive analyses of differentially expressed genes (DEGs) in peripheral blood mononuclear cells (PBMCs) from patients with PTB, lung adenocarcinoma (LUAD), and lung squamous cell carcinoma (LUSC). Microarray assays were employed to analyze the DEGs in PBMCs of these patients. The analyses revealed that, compared to healthy controls, the number of differentially expressed LncRNA in PBMCs from patients with PTB, LUAD, and LUSC were 801, 8,541, and 7,796, respectively. Similarly, the differentially expressed mRNA in PBMCs from patients with PTB, LUAD, and LUSC were 629, 4,865, and 4,438, respectively. These differentially expressed transcripts represent significant resources for the identifying diagnostic and differential diagnostic biomarkers for lung cancer and PTB. Pathways enriched by dysregulated mRNAs in patients with PTB, LUAD, and LUSC were identified through GO and KEGG pathway analyses. The results indicated that 9 pathways including the NOD-like receptor signaling pathway, pathways in cancer, and the MAPK signaling pathway were co-enriched across the PTB, LUAD, and LUSC groups, providing insights into the mechanisms by which PTB may increase the risk of cancer development and progression.</p>","PeriodicalId":12499,"journal":{"name":"Gene","volume":" ","pages":"149199"},"PeriodicalIF":2.6000,"publicationDate":"2025-03-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Differential gene expression in PBMCs: Insights into the mechanism how pulmonary tuberculosis increases lung cancer risk.\",\"authors\":\"Jie Wu, Yang Chen, Xiaoqi Yang, Huabing Kuang, Ting Feng, Chengmin Deng, Xiaoqian Li, Meng Ye, Xin Tan, Ling Gong, Ya Wang, Yuguang Shen, Jingqiu Qu, Kaifeng Wu\",\"doi\":\"10.1016/j.gene.2024.149199\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Pre-existing of pulmonary tuberculosis (PTB) poses increased lung cancer risk, yet the molecular mechanisms remain inadequately understood. This study sought to elucidate the potential mechanisms by performing comprehensive analyses of differentially expressed genes (DEGs) in peripheral blood mononuclear cells (PBMCs) from patients with PTB, lung adenocarcinoma (LUAD), and lung squamous cell carcinoma (LUSC). Microarray assays were employed to analyze the DEGs in PBMCs of these patients. The analyses revealed that, compared to healthy controls, the number of differentially expressed LncRNA in PBMCs from patients with PTB, LUAD, and LUSC were 801, 8,541, and 7,796, respectively. Similarly, the differentially expressed mRNA in PBMCs from patients with PTB, LUAD, and LUSC were 629, 4,865, and 4,438, respectively. These differentially expressed transcripts represent significant resources for the identifying diagnostic and differential diagnostic biomarkers for lung cancer and PTB. Pathways enriched by dysregulated mRNAs in patients with PTB, LUAD, and LUSC were identified through GO and KEGG pathway analyses. The results indicated that 9 pathways including the NOD-like receptor signaling pathway, pathways in cancer, and the MAPK signaling pathway were co-enriched across the PTB, LUAD, and LUSC groups, providing insights into the mechanisms by which PTB may increase the risk of cancer development and progression.</p>\",\"PeriodicalId\":12499,\"journal\":{\"name\":\"Gene\",\"volume\":\" \",\"pages\":\"149199\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2025-03-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Gene\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1016/j.gene.2024.149199\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/12/26 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q2\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Gene","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1016/j.gene.2024.149199","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/12/26 0:00:00","PubModel":"Epub","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
引用次数: 0

摘要

先前存在的肺结核(PTB)增加了肺癌的风险,但其分子机制仍不充分了解。本研究试图通过对PTB、肺腺癌(LUAD)和肺鳞状细胞癌(LUSC)患者外周血单个核细胞(PBMCs)中差异表达基因(DEGs)的综合分析来阐明潜在的机制。采用微阵列法分析这些患者外周血细胞中的deg。分析显示,与健康对照相比,PTB、LUAD和LUSC患者的PBMCs中差异表达的LncRNA数量分别为801、8541和7796。同样,PTB、LUAD和LUSC患者的PBMCs中差异表达的mRNA分别为629、4865和4438。这些差异表达的转录本为鉴别肺癌和肺结核的诊断和鉴别诊断生物标志物提供了重要的资源。通过GO和KEGG通路分析,发现PTB、LUAD和LUSC患者中由失调mrna富集的通路。结果表明,nod样受体信号通路、癌症通路和MAPK信号通路在PTB、LUAD和LUSC组中共同富集,为PTB可能增加癌症发生和进展风险的机制提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Differential gene expression in PBMCs: Insights into the mechanism how pulmonary tuberculosis increases lung cancer risk.

Pre-existing of pulmonary tuberculosis (PTB) poses increased lung cancer risk, yet the molecular mechanisms remain inadequately understood. This study sought to elucidate the potential mechanisms by performing comprehensive analyses of differentially expressed genes (DEGs) in peripheral blood mononuclear cells (PBMCs) from patients with PTB, lung adenocarcinoma (LUAD), and lung squamous cell carcinoma (LUSC). Microarray assays were employed to analyze the DEGs in PBMCs of these patients. The analyses revealed that, compared to healthy controls, the number of differentially expressed LncRNA in PBMCs from patients with PTB, LUAD, and LUSC were 801, 8,541, and 7,796, respectively. Similarly, the differentially expressed mRNA in PBMCs from patients with PTB, LUAD, and LUSC were 629, 4,865, and 4,438, respectively. These differentially expressed transcripts represent significant resources for the identifying diagnostic and differential diagnostic biomarkers for lung cancer and PTB. Pathways enriched by dysregulated mRNAs in patients with PTB, LUAD, and LUSC were identified through GO and KEGG pathway analyses. The results indicated that 9 pathways including the NOD-like receptor signaling pathway, pathways in cancer, and the MAPK signaling pathway were co-enriched across the PTB, LUAD, and LUSC groups, providing insights into the mechanisms by which PTB may increase the risk of cancer development and progression.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Gene
Gene 生物-遗传学
CiteScore
6.10
自引率
2.90%
发文量
718
审稿时长
42 days
期刊介绍: Gene publishes papers that focus on the regulation, expression, function and evolution of genes in all biological contexts, including all prokaryotic and eukaryotic organisms, as well as viruses.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信