鳞翅目:夜蛾科)对短期低温胁迫反应的转录组分析。

IF 2.2 2区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Huawei Ren, Junrui Zhi, Dingyin Li, Wenbo Yue, Li Liu
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引用次数: 0

摘要

Spodoptera frugiperda 是一种主要的入侵害虫,对全世界的农作物构成严重威胁。低温是限制该害虫生存和繁殖的关键因素。为了研究蚜蝇对低温胁迫的反应,研究人员利用高通量测序技术对 5 ℃ 和 10 ℃ 低温胁迫下的 6 龄幼虫进行了转录组分析,并以 25 ℃ 作为对照。结果发现,在不同低温胁迫下有 215 个差异表达基因(DEG)。在 KEGG 和 GO 数据库中对 DEGs 进行功能注释时,对照组与 LT10 比较中注释的 DEGs 数量最多(n = 150),而对照组与 LT5 比较中注释的 DEGs 数量较少(n = 89)。这一差异表明,节肢动物可能采取了不同的策略来应对低温胁迫。GO 数据库中的 DEGs 特别与细胞催化活性、细胞解剖实体过程、细胞凋亡和细胞结合通道有关。对不同低温胁迫的KEGG注释分析表明,大部分富集的通路与碳代谢、氧化磷酸化和脂质代谢有关。该研究结果将为掌握节肢动物的耐低温机制奠定基础,对节肢动物的防病治病具有重要意义。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Transcriptomic analysis of the response of Spodoptera frugiperda (Lepidoptera: Noctuidae) to short-term low-temperature stress

Transcriptomic analysis of the response of Spodoptera frugiperda (Lepidoptera: Noctuidae) to short-term low-temperature stress
Spodoptera frugiperda is a major invasive pest that poses a serious threat to crops worldwide. Low temperature is a key factor limiting the survival and reproduction for this pest. To study the responses of S. frugiperda to low-temperature stress, high-throughput sequencing was used to perform transcriptomic analysis on the 6th instar larvae under low-temperature stress at 5 °C and 10 °C, along with 25 °C as a control. As a result, 215 differentially expressed genes (DEGs) were identified under different low-temperature stresses. Upon functional annotation of the DEGs in KEGG and GO databases, the number of DEGs annotated in control vs. LT10 comparison was the largest (n = 150), whereas fewer DEGs (n = 89) were annotated in control vs. LT5 comparison. This discrepancy suggested that S. frugiperda might adopt different strategies to cope with low-temperature stress. The DEGs in the GO database were particularly associated with cell catalytic activity, cell anatomical entity process, cell apoptosis, and cell binding channel. KEGG annotation analysis of the different low-temperature stresses showed that most of the enriched pathways were related to carbon metabolism, oxidative phosphorylation, and lipid metabolism. The results will be the basis for mastering the cold tolerant mechanism of S. frugiperda, and is of great significance for its prevention.
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来源期刊
CiteScore
5.10
自引率
3.30%
发文量
69
审稿时长
33 days
期刊介绍: Comparative Biochemistry & Physiology (CBP) publishes papers in comparative, environmental and evolutionary physiology. Part D: Genomics and Proteomics (CBPD), focuses on “omics” approaches to physiology, including comparative and functional genomics, metagenomics, transcriptomics, proteomics, metabolomics, and lipidomics. Most studies employ “omics” and/or system biology to test specific hypotheses about molecular and biochemical mechanisms underlying physiological responses to the environment. We encourage papers that address fundamental questions in comparative physiology and biochemistry rather than studies with a focus that is purely technical, methodological or descriptive in nature.
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