阻滞蛋白1的激活与自我关联研究。

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Biochemistry Biochemistry Pub Date : 2025-01-21 Epub Date: 2024-12-20 DOI:10.1021/acs.biochem.4c00632
David Salom, Philip D Kiser, Krzysztof Palczewski
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引用次数: 0

摘要

阻滞蛋白通过与活化的G蛋白偶联受体的磷酸化c端结合而停止信号转导。arrestin1是发现的第一个亚型,与杆状细胞中的视紫红质结合。编码Arrestin-1基因的SAG突变与以黑暗适应延迟为特征的Oguchi病有关。自从发现Arrestin-1以来,在了解这些调节蛋白在光导中的作用方面取得了实质性进展,包括对缺乏该蛋白的动物和人类的视觉表型的表征,剪接变体的发现以及其与肌醇-多磷酸结合的记录。Arrestin-1是光导级联反应中最早被发现的结构蛋白之一。然而,关于导致其与磷酸化视紫红质结合的构象中间体存在知识空白。在通过晶体学捕获的各种哺乳动物Arrestin-1构象中,预激活状态由突变体R175E-Arrestin-1和c端截断剪接变体代表(p44)。本报告描述了一种从牛视网膜中纯化Arrestin-1的新方法,随后进行有限的蛋白水解以获得类似p44的蛋白。我们以1.40 Å的分辨率解决了这个预激活的,缩短的3-367Arrestin-1的晶体结构。该结构揭示了更完整的指环结构和极核在激活arretin -1中的作用。3-367Arrestin-1的结构在Arrestin-1的非活性构象和完全激活构象之间捕获了一种中间形式。最后,我们通过比较不同的Arrestin-1晶体和AlphaFold 3预测的二聚体模型中的填充界面来解决Arrestin-1寡聚化问题。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Insights into the Activation and Self-Association of Arrestin-1.

Arrestins halt signal transduction by binding to the phosphorylated C-termini of activated G protein-coupled receptors. Arrestin-1, the first subtype discovered, binds to rhodopsin in rod cells. Mutations in SAG, the gene encoding Arrestin-1, are linked to Oguchi disease, characterized by delayed dark adaptation. Since the discovery of Arrestin-1, substantial progress has been made in understanding the role of these regulatory proteins in phototransduction, including the characterization of visual phenotypes of animals and humans lacking this protein, discovery of splice variants, and documentation of its binding to inositol-polyphosphates. Arrestin-1 was one of the first structurally characterized proteins in the phototransduction cascade. However, there are knowledge gaps regarding the conformational intermediates leading to its binding to phosphorylated rhodopsin. Among various mammalian Arrestin-1 conformations captured via crystallography, the preactivated state is represented by the mutant R175E-Arrestin-1 and by a C-terminally truncated splice variant (p44). This report describes a novel purification method of Arrestin-1 from bovine retinas followed by limited proteolysis to obtain a protein resembling p44. We solved the crystal structure of this preactivated, shortened 3-367Arrestin-1 at a resolution of 1.40 Å. The structure reveals a more complete picture of the finger loop structure and of the role of the polar core in the activation of Arrestin-1. The structure of 3-367Arrestin-1 captures an intermediate form halfway between the inactive and fully activated conformations of Arrestin-1. Finally, we addressed the question of Arrestin-1 oligomerization by comparing the packing interfaces in different Arrestin-1 crystals and dimer models predicted by AlphaFold 3.

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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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