Saqib Mamoon, Zhengwang Xia, Amani Alfakih, Jianfeng Lu
{"title":"用于识别痴呆症的基于扩散的因果性保留神经网络","authors":"Saqib Mamoon, Zhengwang Xia, Amani Alfakih, Jianfeng Lu","doi":"10.1002/ima.70005","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>Analyzing large-scale functional brain networks for brain disorders often relies on undirected correlations in activation signals between brain regions. While focusing on co-occurring activations, this approach overlooks the potential for directionality inherent in brain connectivity. Established research indicates the causal nature of brain networks, suggesting that activation patterns co-occur and potentially influence one another. To this end, we propose a novel dffusion vector auto-regressive (Diff-VAR) method, enabling the assessment of whole-brain effective connectivity (EC) as a directed and weighted network by integrating the search objectives into the deep neural network model as learnable parameters. The EC learned by our method identifies widespread differences in flow of influence within the brain network for individuals with impaired brain function compared to those with normal brain function. Moreover, we introduce an adaptive smoothing mechanism to enhance the stability and reliability of inferred EC. We evaluated the results of our proposed method on the Alzheimer's Disease Neuroimaging Initiative (ADNI) database. The model's performance is compared with existing correlation-based and causality-based methods. The results revealed that the brain networks constructed by our method achieve high classification accuracy and exhibit features consistent with physiological mechanisms. The code is available at https://github.com/SaqibMamoon/Diff-VAR.</p>\n </div>","PeriodicalId":14027,"journal":{"name":"International Journal of Imaging Systems and Technology","volume":"35 1","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2024-12-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Diffusion-Based Causality-Preserving Neural Network for Dementia Recognition\",\"authors\":\"Saqib Mamoon, Zhengwang Xia, Amani Alfakih, Jianfeng Lu\",\"doi\":\"10.1002/ima.70005\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>Analyzing large-scale functional brain networks for brain disorders often relies on undirected correlations in activation signals between brain regions. While focusing on co-occurring activations, this approach overlooks the potential for directionality inherent in brain connectivity. Established research indicates the causal nature of brain networks, suggesting that activation patterns co-occur and potentially influence one another. To this end, we propose a novel dffusion vector auto-regressive (Diff-VAR) method, enabling the assessment of whole-brain effective connectivity (EC) as a directed and weighted network by integrating the search objectives into the deep neural network model as learnable parameters. The EC learned by our method identifies widespread differences in flow of influence within the brain network for individuals with impaired brain function compared to those with normal brain function. Moreover, we introduce an adaptive smoothing mechanism to enhance the stability and reliability of inferred EC. We evaluated the results of our proposed method on the Alzheimer's Disease Neuroimaging Initiative (ADNI) database. The model's performance is compared with existing correlation-based and causality-based methods. The results revealed that the brain networks constructed by our method achieve high classification accuracy and exhibit features consistent with physiological mechanisms. The code is available at https://github.com/SaqibMamoon/Diff-VAR.</p>\\n </div>\",\"PeriodicalId\":14027,\"journal\":{\"name\":\"International Journal of Imaging Systems and Technology\",\"volume\":\"35 1\",\"pages\":\"\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2024-12-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Imaging Systems and Technology\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/ima.70005\",\"RegionNum\":4,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Imaging Systems and Technology","FirstCategoryId":"94","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/ima.70005","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
Diffusion-Based Causality-Preserving Neural Network for Dementia Recognition
Analyzing large-scale functional brain networks for brain disorders often relies on undirected correlations in activation signals between brain regions. While focusing on co-occurring activations, this approach overlooks the potential for directionality inherent in brain connectivity. Established research indicates the causal nature of brain networks, suggesting that activation patterns co-occur and potentially influence one another. To this end, we propose a novel dffusion vector auto-regressive (Diff-VAR) method, enabling the assessment of whole-brain effective connectivity (EC) as a directed and weighted network by integrating the search objectives into the deep neural network model as learnable parameters. The EC learned by our method identifies widespread differences in flow of influence within the brain network for individuals with impaired brain function compared to those with normal brain function. Moreover, we introduce an adaptive smoothing mechanism to enhance the stability and reliability of inferred EC. We evaluated the results of our proposed method on the Alzheimer's Disease Neuroimaging Initiative (ADNI) database. The model's performance is compared with existing correlation-based and causality-based methods. The results revealed that the brain networks constructed by our method achieve high classification accuracy and exhibit features consistent with physiological mechanisms. The code is available at https://github.com/SaqibMamoon/Diff-VAR.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.