开创性的现实世界数据对抗肝细胞癌-通过合并前卫策略发现可重复使用的药物。

IF 2.4 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Gouri Nair, Ganesan Rajalekshmi Saraswathy, Prasanna Kumar Reddy Gayam, Jesil Mathew Aranjani, T P Krishna Murthy, Viswam Subeesh
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引用次数: 0

摘要

在投入大量资源开发未开发的新化学实体之前,药物再利用比重新开发药物更适合于揭示现有候选药物的治疗应用。这项研究展示了多方面的策略,通过将真实世界数据(RWD)与生物信息学算法相结合,通过计算机和体外研究证实,来侦察有希望的可重新用于治疗肝细胞癌(HCC)的候选药物。首先,研究人员探索了食品和药物管理局不良事件报告系统(FAERS)的RWD,通过歧化分析来检索与HCC负相关的可重复使用药物的信号。此外,转录组学分析用于捕获HCC的潜在靶点。在此之后,通过分子对接和分子动力学模拟(MDS)虚拟地证明了可重复使用药物与HCC靶点之间的相互作用。此外,进行了额外的细胞毒性和基因表达实验来证实结果。总体而言,根据FAERS获得的RWD, 64种药物事件bbb50被列入前瞻性可重复利用药物。转录组学分析强调了细胞周期蛋白A2 (CCNA2)在HCC中的显著上调,这激活了细胞周期蛋白依赖性激酶2 (CDK2)。此外,计算机研究确定氯沙坦和别嘌呤醇作为潜在的可重复利用药物,对接评分分别为-7.11和-6.219。选定的药物通过体外研究进行了进一步的审查。别嘌呤醇处理HepG2细胞后,CCNA2/CDK2表达显著下调,活性氧水平升高,揭示了别嘌呤醇通过细胞凋亡的抗癌机制。这项研究提示了RWD在药物再利用中的重要性,以及别嘌呤醇作为一种抗HCC的可再利用药物的潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Trailblazing real-world-data to confront hepatocellular carcinoma - disinterring repurposable drugs by amalgamating avant-garde stratagems.

Drug repurposing is preferred over de-novo drug discovery to unveil the therapeutic applications of existing drug candidates before investing considerable resources in unexplored novel chemical entities. This study demonstrated multifaceted stratagems to reconnoiter promising repurposable candidates against Hepatocellular Carcinoma (HCC) by amalgamating Real-World-Data (RWD) with bioinformatics algorithms corroborated with in-silico and in-vitro studies. At the outset, the RWD from the Food and Drug Administration Adverse Event Reporting System (FAERS) was explored to navigate signals to retrieve repurposable drugs that are inversely associated with HCC via Disproportionality Analysis. Further, transcriptomic analysis was used to capture the potential targets of HCC. Following this, the interactions between repurposable drugs and HCC targets were virtually demonstrated via molecular docking and Molecular Dynamics Simulations (MDS). Furthermore, additional cytotoxicity and gene expression experiments were conducted to corroborate the results. Overall, 64 drugs with Drug Event >5 were shortlisted as prospective repurposable drugs as per the RWD obtained from FAERS. The transcriptomic analysis highlighted significant upregulation of Cyclin A2 (CCNA2) in HCC, which activates Cyclin Dependent Kinase 2 (CDK2). Further, in-silico studies identified Losartan and Allopurinol, with docking scores of -7.11 and -6.219, respectively, as potential repurposable drugs. The selected drugs underwent further scrutiny through in-vitro studies. The treatment of HepG2 cells with Allopurinol resulted in significant downregulation of CCNA2/CDK2 expression with an elevation in reactive oxygen species levels, uncovering Allopurinol's anticancer mechanism through cellular apoptosis. This study suggests the importance of RWD in drug repurposing and the potential of Allopurinol as a repurposable drug against HCC.

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来源期刊
Journal of Biomolecular Structure & Dynamics
Journal of Biomolecular Structure & Dynamics 生物-生化与分子生物学
CiteScore
8.90
自引率
9.10%
发文量
597
审稿时长
2 months
期刊介绍: The Journal of Biomolecular Structure and Dynamics welcomes manuscripts on biological structure, dynamics, interactions and expression. The Journal is one of the leading publications in high end computational science, atomic structural biology, bioinformatics, virtual drug design, genomics and biological networks.
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