{"title":"深度学习驱动的碳锥和富勒烯化学加成模式预测","authors":"Zhengda Li, Xuyang Chen, Yang Wang","doi":"10.1039/d4cp03238a","DOIUrl":null,"url":null,"abstract":"Carboncones and fullerenes are exemplary π-conjugated carbon nanomaterials with unsaturated, positively curved surfaces, enabling the attachment of atoms or functional groups to enhance their physicochemical properties. However, predicting and understanding the addition patterns in functionalized carboncones and fullerenes are extremely challenging due to the formidable complexity of the regioselectivity exhibited in the adducts. Existing predictive models fall short in systems where the carbon molecular framework undergoes severe distortion upon high degrees of addition. Here, we propose an incremental deep learning approach to predict regioselectivity in the hydrogenation of carboncones and chlorination of fullerenes. Utilizing exclusively graph-based features, our deep neural network (DNN) models rely solely on atomic connectivity, without requiring 3D molecular coordinates as input or iterative optimization of them. This advantage inherently avoids the risk of obtaining chemically unreasonable optimized structures, enabling the handling of highly distorted adducts. The DNN models allow us to study regioselectivity in hydrogenated carboncones of C<small><sub>70</sub></small>H<small><sub>20</sub></small> and C<small><sub>62</sub></small>H<small><sub>16</sub></small>, accommodating up to at least, 40 and 30 additional H atoms, respectively. Our approach also correctly predicts experimental addition patterns in C<small><sub>50</sub></small>Cl<small><sub>10</sub></small> and C<small><sub>76</sub></small>Cl<small><sub><em>n</em></sub></small> (<em>n</em> = 18, 24, and 28), whereas in the latter cases all other known methods have proven unsuccessful. Compared to our previously developed topology-based models, the DNN’s superior predictive power and generalization ability make it a promising tool for investigating complex addition patterns in similar chemical systems.","PeriodicalId":99,"journal":{"name":"Physical Chemistry Chemical Physics","volume":"10 1","pages":""},"PeriodicalIF":2.9000,"publicationDate":"2024-12-17","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Deep Learning-Driven Prediction of Chemical Addition Patterns for Carboncones and Fullerenes\",\"authors\":\"Zhengda Li, Xuyang Chen, Yang Wang\",\"doi\":\"10.1039/d4cp03238a\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Carboncones and fullerenes are exemplary π-conjugated carbon nanomaterials with unsaturated, positively curved surfaces, enabling the attachment of atoms or functional groups to enhance their physicochemical properties. However, predicting and understanding the addition patterns in functionalized carboncones and fullerenes are extremely challenging due to the formidable complexity of the regioselectivity exhibited in the adducts. Existing predictive models fall short in systems where the carbon molecular framework undergoes severe distortion upon high degrees of addition. Here, we propose an incremental deep learning approach to predict regioselectivity in the hydrogenation of carboncones and chlorination of fullerenes. Utilizing exclusively graph-based features, our deep neural network (DNN) models rely solely on atomic connectivity, without requiring 3D molecular coordinates as input or iterative optimization of them. This advantage inherently avoids the risk of obtaining chemically unreasonable optimized structures, enabling the handling of highly distorted adducts. The DNN models allow us to study regioselectivity in hydrogenated carboncones of C<small><sub>70</sub></small>H<small><sub>20</sub></small> and C<small><sub>62</sub></small>H<small><sub>16</sub></small>, accommodating up to at least, 40 and 30 additional H atoms, respectively. Our approach also correctly predicts experimental addition patterns in C<small><sub>50</sub></small>Cl<small><sub>10</sub></small> and C<small><sub>76</sub></small>Cl<small><sub><em>n</em></sub></small> (<em>n</em> = 18, 24, and 28), whereas in the latter cases all other known methods have proven unsuccessful. Compared to our previously developed topology-based models, the DNN’s superior predictive power and generalization ability make it a promising tool for investigating complex addition patterns in similar chemical systems.\",\"PeriodicalId\":99,\"journal\":{\"name\":\"Physical Chemistry Chemical Physics\",\"volume\":\"10 1\",\"pages\":\"\"},\"PeriodicalIF\":2.9000,\"publicationDate\":\"2024-12-17\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Physical Chemistry Chemical Physics\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1039/d4cp03238a\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Physical Chemistry Chemical Physics","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1039/d4cp03238a","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Deep Learning-Driven Prediction of Chemical Addition Patterns for Carboncones and Fullerenes
Carboncones and fullerenes are exemplary π-conjugated carbon nanomaterials with unsaturated, positively curved surfaces, enabling the attachment of atoms or functional groups to enhance their physicochemical properties. However, predicting and understanding the addition patterns in functionalized carboncones and fullerenes are extremely challenging due to the formidable complexity of the regioselectivity exhibited in the adducts. Existing predictive models fall short in systems where the carbon molecular framework undergoes severe distortion upon high degrees of addition. Here, we propose an incremental deep learning approach to predict regioselectivity in the hydrogenation of carboncones and chlorination of fullerenes. Utilizing exclusively graph-based features, our deep neural network (DNN) models rely solely on atomic connectivity, without requiring 3D molecular coordinates as input or iterative optimization of them. This advantage inherently avoids the risk of obtaining chemically unreasonable optimized structures, enabling the handling of highly distorted adducts. The DNN models allow us to study regioselectivity in hydrogenated carboncones of C70H20 and C62H16, accommodating up to at least, 40 and 30 additional H atoms, respectively. Our approach also correctly predicts experimental addition patterns in C50Cl10 and C76Cln (n = 18, 24, and 28), whereas in the latter cases all other known methods have proven unsuccessful. Compared to our previously developed topology-based models, the DNN’s superior predictive power and generalization ability make it a promising tool for investigating complex addition patterns in similar chemical systems.
期刊介绍:
Physical Chemistry Chemical Physics (PCCP) is an international journal co-owned by 19 physical chemistry and physics societies from around the world. This journal publishes original, cutting-edge research in physical chemistry, chemical physics and biophysical chemistry. To be suitable for publication in PCCP, articles must include significant innovation and/or insight into physical chemistry; this is the most important criterion that reviewers and Editors will judge against when evaluating submissions.
The journal has a broad scope and welcomes contributions spanning experiment, theory, computation and data science. Topical coverage includes spectroscopy, dynamics, kinetics, statistical mechanics, thermodynamics, electrochemistry, catalysis, surface science, quantum mechanics, quantum computing and machine learning. Interdisciplinary research areas such as polymers and soft matter, materials, nanoscience, energy, surfaces/interfaces, and biophysical chemistry are welcomed if they demonstrate significant innovation and/or insight into physical chemistry. Joined experimental/theoretical studies are particularly appreciated when complementary and based on up-to-date approaches.