海参在繁殖和休眠之间的生理变化所依赖的神经内分泌调控网络:转录组分析的启示

Lifei Ge, Jixiu Wang, Zhijing Jiang, Zhiqing Ye, Ying Wei, Yibo Wang, Yuting Liu, Chenqian Wu, Xiuwen Xu, Jingwen Yang, Lina Sun, Tianming Wang
{"title":"海参在繁殖和休眠之间的生理变化所依赖的神经内分泌调控网络:转录组分析的启示","authors":"Lifei Ge, Jixiu Wang, Zhijing Jiang, Zhiqing Ye, Ying Wei, Yibo Wang, Yuting Liu, Chenqian Wu, Xiuwen Xu, Jingwen Yang, Lina Sun, Tianming Wang","doi":"10.1016/j.cbd.2024.101393","DOIUrl":null,"url":null,"abstract":"<p><p>The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.</p>","PeriodicalId":93949,"journal":{"name":"Comparative biochemistry and physiology. Part D, Genomics & proteomics","volume":"54 ","pages":"101393"},"PeriodicalIF":0.0000,"publicationDate":"2024-12-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Neuroendocrine regulatory network underlying physiological shifts between reproduction and aestivation of sea cucumber Apostichopus japonicus: Insights from transcriptome analysis.\",\"authors\":\"Lifei Ge, Jixiu Wang, Zhijing Jiang, Zhiqing Ye, Ying Wei, Yibo Wang, Yuting Liu, Chenqian Wu, Xiuwen Xu, Jingwen Yang, Lina Sun, Tianming Wang\",\"doi\":\"10.1016/j.cbd.2024.101393\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.</p>\",\"PeriodicalId\":93949,\"journal\":{\"name\":\"Comparative biochemistry and physiology. Part D, Genomics & proteomics\",\"volume\":\"54 \",\"pages\":\"101393\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-12-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Comparative biochemistry and physiology. Part D, Genomics & proteomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://doi.org/10.1016/j.cbd.2024.101393\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Comparative biochemistry and physiology. Part D, Genomics & proteomics","FirstCategoryId":"1085","ListUrlMain":"https://doi.org/10.1016/j.cbd.2024.101393","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"","JCRName":"","Score":null,"Total":0}
引用次数: 0

摘要

海参(Apostichopus japonicus)是中国具有重要经济价值的海洋物种,许多研究都集中于其各种生理过程,包括季节性繁殖和休眠。神经内分泌系统在调节这些生理转换过程中发挥着关键作用。在本研究中,我们利用转录组学技术和生物信息学工具鉴定了日本栉孔鲷在繁殖前、繁殖后、休眠和休眠恢复四个不同生理阶段的神经环中的关键功能基因。共鉴定出 33 种神经肽前体和 521 种 G 蛋白偶联受体(GPCR)。研究提出了AjCRZP、AjPDFP1b、AjSSP1、AjSSP2和AjSSTR4等关键基因,这些基因有助于从繁殖到休眠的过渡。我们通过 qRT-PCR 分析验证了差异表达基因(DEGs)的时间趋势和功能。此外,我们还构建了一个初步的神经内分泌调控网络,其中 AjGALR2 和 AjCHRM5 被确定为中心枢纽基因。这些发现为我们深入了解日本刺参繁殖和休眠的神经内分泌调控提供了宝贵的视角,为进一步的机理研究奠定了基础,并加深了我们对海参生物学的理解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Neuroendocrine regulatory network underlying physiological shifts between reproduction and aestivation of sea cucumber Apostichopus japonicus: Insights from transcriptome analysis.

The sea cucumber Apostichopus japonicus is an economically significant marine species in China, with numerous studies focusing on its diverse physiological processes, including seasonal reproduction and aestivation. The neuroendocrine system plays a critical role in regulating these physiological transitions. In this study, we utilized transcriptomic techniques and bioinformatics tools to identify key functional genes in the nerve ring of A. japonicus during four distinct physiological phases: pre-reproduction, post-reproduction, aestivation, and recovery from aestivation. Totally 33 neuropeptide precursors and 521 G protein-coupled receptors (GPCRs) were identified. Highlighted key genes, such as AjCRZP, AjPDFP1b, AjSSP1, AjSSP2, and AjSSTR4, were proposed to contribute to transitions of reproduction to aestivation. The temporal trends and functions of differentially expressed genes (DEGs) were validated through qRT-PCR assays. Additionally, we constructed a preliminary neuroendocrine regulatory network, with AjGALR2 and AjCHRM5 identified as central hub genes. These findings offer valuable insights into the neuroendocrine regulation of reproduction and aestivation in A. japonicus, providing a foundation for further mechanistic studies and enhancing our understanding of sea cucumber biology.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
自引率
0.00%
发文量
0
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信