结直肠癌中热渗透相关基因的分子特征、临床意义以及癌症与免疫之间的相互作用

IF 2.5 4区 医学 Q3 ONCOLOGY
Oncology Letters Pub Date : 2024-12-05 eCollection Date: 2025-02-01 DOI:10.3892/ol.2024.14835
Chenglong He, Wenjing Dong, Yanhua Lyu, Yan Qin, Siquan Zhong, Xiaomei Jiang, Jianjun Xiao
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引用次数: 0

摘要

大肠癌(CRC)是一种预后不良的恶性肿瘤。热休克是一种新发现的程序性细胞死亡,通常伴随着强烈的炎症反应。越来越多的证据表明,热休克相关基因(PRGs)可能在恶性肿瘤的发展过程中起着重要作用。然而,PRG 表达与 CRC 临床预后之间的关系仍不清楚。本研究利用癌症基因组图谱(The Cancer Genome Atlas)和基因表达总库(Gene Expression Omnibus)中的队列全面分析了 52 个 PRGs 的遗传变异和转录模式,并利用反转录定量 PCR 验证了采集的 CRC 样本中 7 个 PRGs 的 mRNA 表达水平。然后利用 LASSO-Cox 分析法得出 PRG 评分,并揭示了 PRG 评分与 CRC 预后、免疫细胞浸润和药物敏感性之间的关系。本研究分析了 PRGs 的突变和表达模式,发现与正常组织相比,这些基因在 CRC 组织中的表达存在差异。根据 PRGs 的表达模式,CRC 患者被分为两个亚型(A 组和 B 组),其中 B 组预后较好,免疫细胞数量较多。然后,确定了 A 组和 B 组之间的差异表达基因,并构建了与 CRC 预后密切相关的 PRG 风险评分。然后,构建了评估患者总生存期的提名图。此外,低 PRG 风险评分的特征是免疫激活,并与微卫星不稳定性高模式密切相关。此外,PRG 风险评分还与药物敏感性显著相关。总之,本研究全面分析了 CRC 中 PRGs 的突变和表达特征,并构建了 PRGs 预后特征。该特征可预测 CRC 的免疫细胞浸润和治疗反应,为 CRC 的预后和治疗提供了新的见解。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Molecular characteristics, clinical significance and cancer‑immune interactions of pyroptosis‑related genes in colorectal cancer.

Colorectal cancer (CRC) is a malignant tumor with poor prognosis. Pyroptosis is a newly discovered type of programmed cell death that is typically accompanied by a strong inflammatory response. Accumulating evidence suggests that pyroptosis-related genes (PRGs) may have important roles in the development of malignant tumors. However, the association between PRG expression and clinical outcomes in CRC remain unclear. In the present study, the genetic variations and transcriptional patterns of 52 PRGs were comprehensively analyzed using cohorts from The Cancer Genome Atlas and Gene Expression Omnibus and the mRNA expression levels of 7 PRGs in collected CRC samples were validated using reverse transcription-quantitative PCR. Using LASSO-Cox analysis, a PRG score was then generated and the relationship between the PRG score and prognosis, immune cell infiltration and drug sensitivity in CRC was uncovered. In the present study, the mutation and expression patterns of PRGs were analyzed and it was found that these genes were differentially expressed in CRC tissues compared with normal tissues. Based on the expression patterns of the PRGs, patients with CRC were divided into two subtypes (cluster A and B), of which cluster B had an improved prognosis and a higher abundance of immune cells. Next, differentially expressed genes between clusters A and B were identified and a PRG risk score closely related to the prognosis of CRC was constructed. Then, a nomogram for evaluating the overall survival of patients was constructed. Furthermore, a low PRG risk score was characterized by immune activation and closely related to the microsatellite instability-high pattern. Additionally, the PRG risk score was notably correlated with drug sensitivity. In conclusion, the mutation and expression characteristics of PRGs in CRC were comprehensively analyzed and a prognostic PRG signature was constructed in the present study. This signature may predict immune cell infiltration and therapeutic response in CRC, providing new insights into the prognosis and treatment of CRC.

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来源期刊
Oncology Letters
Oncology Letters ONCOLOGY-
CiteScore
5.70
自引率
0.00%
发文量
412
审稿时长
2.0 months
期刊介绍: Oncology Letters is a monthly, peer-reviewed journal, available in print and online, that focuses on all aspects of clinical oncology, as well as in vitro and in vivo experimental model systems relevant to the mechanisms of disease. The principal aim of Oncology Letters is to provide the prompt publication of original studies of high quality that pertain to clinical oncology, chemotherapy, oncogenes, carcinogenesis, metastasis, epidemiology and viral oncology in the form of original research, reviews and case reports.
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