{"title":"2-(4-叔丁基-2,6-二甲基-3-羟基苄基)-2-咪唑啉的量子化学计算、光谱特性、分子对接和 ADMET 研究","authors":"Taner Kalayci","doi":"10.1007/s13538-024-01674-w","DOIUrl":null,"url":null,"abstract":"<div><p>This study focuses on examining the molecular geometry, biological activities, as well as the electronic and vibrational properties of 2-(4-tert-butyl-2,6-dimethyl-3-hydroxybenzyl)-2-imidazoline (oxymetazoline). The investigation integrates quantum chemical calculations, molecular docking, and experimental methods. The ground state geometry and electronic structure of oxymetazoline are optimized using the DFT/B3LYP/6–311 + + G(d,p) basis set. To predict the chemical reactivity of the title molecule, MEPS, frontier orbital analysis, and electronic reactivity descriptors were used. Charge transfer within the molecule was presented using HOMO and LUMO energies. The energies of intra and intermolecular hydrogen bonds in molecules, as well as their electronic properties, were examined using natural bond orbitals (NBOs). To determine the efficiency of the title chemical, molecular docking tests were undertaken against α1A and α2A adrenergic receptors (α1A; PDB ID: 7YM8, 4MQT, and α2A; PDB ID: 3QAK, 7EJ8). According to the results, we found that the situation with the lowest binding score and therefore the best binding affinity is the OMZ-7YM8 interaction. The analysis of drug-likeness, physicochemical properties, and ADMET results indicates that the title molecule possesses a favorable pharmacokinetic profile and adheres to Lipinski’s Rule of Five, demonstrating efficient absorption and distribution. Consequently, the study supports the use of oxymetazoline as an inhibitor of α1A and α2A adrenergic receptors.</p></div>","PeriodicalId":499,"journal":{"name":"Brazilian Journal of Physics","volume":"55 1","pages":""},"PeriodicalIF":1.5000,"publicationDate":"2024-12-16","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Quantum Chemical Calculations, Spectroscopic Properties, Molecular Docking and ADMET Studies of 2-(4-Tert-Butyl-2,6-Dimethyl-3-Hydroxybenzyl)-2-Imidazoline\",\"authors\":\"Taner Kalayci\",\"doi\":\"10.1007/s13538-024-01674-w\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><p>This study focuses on examining the molecular geometry, biological activities, as well as the electronic and vibrational properties of 2-(4-tert-butyl-2,6-dimethyl-3-hydroxybenzyl)-2-imidazoline (oxymetazoline). The investigation integrates quantum chemical calculations, molecular docking, and experimental methods. The ground state geometry and electronic structure of oxymetazoline are optimized using the DFT/B3LYP/6–311 + + G(d,p) basis set. To predict the chemical reactivity of the title molecule, MEPS, frontier orbital analysis, and electronic reactivity descriptors were used. Charge transfer within the molecule was presented using HOMO and LUMO energies. The energies of intra and intermolecular hydrogen bonds in molecules, as well as their electronic properties, were examined using natural bond orbitals (NBOs). To determine the efficiency of the title chemical, molecular docking tests were undertaken against α1A and α2A adrenergic receptors (α1A; PDB ID: 7YM8, 4MQT, and α2A; PDB ID: 3QAK, 7EJ8). According to the results, we found that the situation with the lowest binding score and therefore the best binding affinity is the OMZ-7YM8 interaction. The analysis of drug-likeness, physicochemical properties, and ADMET results indicates that the title molecule possesses a favorable pharmacokinetic profile and adheres to Lipinski’s Rule of Five, demonstrating efficient absorption and distribution. Consequently, the study supports the use of oxymetazoline as an inhibitor of α1A and α2A adrenergic receptors.</p></div>\",\"PeriodicalId\":499,\"journal\":{\"name\":\"Brazilian Journal of Physics\",\"volume\":\"55 1\",\"pages\":\"\"},\"PeriodicalIF\":1.5000,\"publicationDate\":\"2024-12-16\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Brazilian Journal of Physics\",\"FirstCategoryId\":\"101\",\"ListUrlMain\":\"https://link.springer.com/article/10.1007/s13538-024-01674-w\",\"RegionNum\":4,\"RegionCategory\":\"物理与天体物理\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"PHYSICS, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Brazilian Journal of Physics","FirstCategoryId":"101","ListUrlMain":"https://link.springer.com/article/10.1007/s13538-024-01674-w","RegionNum":4,"RegionCategory":"物理与天体物理","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"PHYSICS, MULTIDISCIPLINARY","Score":null,"Total":0}
Quantum Chemical Calculations, Spectroscopic Properties, Molecular Docking and ADMET Studies of 2-(4-Tert-Butyl-2,6-Dimethyl-3-Hydroxybenzyl)-2-Imidazoline
This study focuses on examining the molecular geometry, biological activities, as well as the electronic and vibrational properties of 2-(4-tert-butyl-2,6-dimethyl-3-hydroxybenzyl)-2-imidazoline (oxymetazoline). The investigation integrates quantum chemical calculations, molecular docking, and experimental methods. The ground state geometry and electronic structure of oxymetazoline are optimized using the DFT/B3LYP/6–311 + + G(d,p) basis set. To predict the chemical reactivity of the title molecule, MEPS, frontier orbital analysis, and electronic reactivity descriptors were used. Charge transfer within the molecule was presented using HOMO and LUMO energies. The energies of intra and intermolecular hydrogen bonds in molecules, as well as their electronic properties, were examined using natural bond orbitals (NBOs). To determine the efficiency of the title chemical, molecular docking tests were undertaken against α1A and α2A adrenergic receptors (α1A; PDB ID: 7YM8, 4MQT, and α2A; PDB ID: 3QAK, 7EJ8). According to the results, we found that the situation with the lowest binding score and therefore the best binding affinity is the OMZ-7YM8 interaction. The analysis of drug-likeness, physicochemical properties, and ADMET results indicates that the title molecule possesses a favorable pharmacokinetic profile and adheres to Lipinski’s Rule of Five, demonstrating efficient absorption and distribution. Consequently, the study supports the use of oxymetazoline as an inhibitor of α1A and α2A adrenergic receptors.
期刊介绍:
The Brazilian Journal of Physics is a peer-reviewed international journal published by the Brazilian Physical Society (SBF). The journal publishes new and original research results from all areas of physics, obtained in Brazil and from anywhere else in the world. Contents include theoretical, practical and experimental papers as well as high-quality review papers. Submissions should follow the generally accepted structure for journal articles with basic elements: title, abstract, introduction, results, conclusions, and references.