Aparna Kushwaha, Devyani Srivastava, Gabriele Kociok-Köhn, Sarfaraz Ahmed, Edward R. T. Tiekink and Abhinav Kumar
{"title":"一维苯基汞(ii)3-烷氧基环丁烯-1,2-二酮-4-硫醇配位聚合物中 Hg⋯O/S spodium 键和 O⋯S chalcogen 键的性质及其相互作用†。","authors":"Aparna Kushwaha, Devyani Srivastava, Gabriele Kociok-Köhn, Sarfaraz Ahmed, Edward R. T. Tiekink and Abhinav Kumar","doi":"10.1039/D4CE00879K","DOIUrl":null,"url":null,"abstract":"<p >Two one-dimensional coordination polymers, PhHg(3-alkoxycyclobutene-1,2-dione-4-thiolate) (alkoxy = OMe and OEt), have been synthesised, characterised spectroscopically, crystallographically and through computational chemistry techniques. Both species exhibit intermolecular Hg⋯O σ-hole spodium bonding as well as intramolecular Hg⋯O π-hole spodium bonding. In the ethoxy species there are complementary σ-hole O⋯S chalcogen bonds to the Hg⋯O σ-hole spodium bonding as well as orthogonal Hg⋯S π-hole spodium bonding. Each of the coordination polymers is connected into a supramolecular layer. For the methoxy derivative, the layer features π(cyclobutene)⋯π(phenyl) stacking and side-on C<img>O⋯π(cyclobutene)/anti-parallel carbonyl⋯carbonyl interactions. For the ethoxy species, Hg⋯S, offset π(cyclobutene)⋯π(cyclobutene) stacking and C<img>O⋯π(cyclobutene) interactions occur within the layer. In each case, weak C–H⋯π interactions operate between the two-dimensional arrays. The nature of the electron transfer responsible for the spodium/chalcogen bonding has been established. In terms of QTAIM energies, those associated with Hg⋯O σ-hole spodium bonds were in the range of 17.5 to 23.3 kJ mol<small><sup>−1</sup></small>, which were less than the energies computed for the intramolecular Hg⋯O π-hole spodium bonds in each case (31.0 to 43.6 kJ mol<small><sup>−1</sup></small>). The lowest energies for the intermolecular Hg⋯O spodium bonding were computed for the ethoxy species, which correlates with the compensating Hg⋯S π-hole spodium bonding (2 × 11.0 kJ mol<small><sup>−1</sup></small>) and O⋯S chalcogen bonding (12.5 kJ mol<small><sup>−1</sup></small>). The electron transfer leading to the Hg⋯O/S spodium bonding involves donation of an oxygen- or sulphur-bound lone pair of electrons to the σ*(Hg–C) orbital, with the intramolecular Hg⋯O spodium bond involving two lone pair interactions. The O⋯S chalcogen bond is assigned to LP(O) → σ*(C–S).</p>","PeriodicalId":70,"journal":{"name":"CrystEngComm","volume":" 1","pages":" 64-80"},"PeriodicalIF":2.6000,"publicationDate":"2024-11-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"On the nature and interplay of Hg⋯O/S spodium bonding and O⋯S chalcogen bonding in one-dimensional phenylmercury(ii) 3-alkoxycyclobutene-1,2-dione-4-thiolate coordination polymers†\",\"authors\":\"Aparna Kushwaha, Devyani Srivastava, Gabriele Kociok-Köhn, Sarfaraz Ahmed, Edward R. T. Tiekink and Abhinav Kumar\",\"doi\":\"10.1039/D4CE00879K\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p >Two one-dimensional coordination polymers, PhHg(3-alkoxycyclobutene-1,2-dione-4-thiolate) (alkoxy = OMe and OEt), have been synthesised, characterised spectroscopically, crystallographically and through computational chemistry techniques. Both species exhibit intermolecular Hg⋯O σ-hole spodium bonding as well as intramolecular Hg⋯O π-hole spodium bonding. In the ethoxy species there are complementary σ-hole O⋯S chalcogen bonds to the Hg⋯O σ-hole spodium bonding as well as orthogonal Hg⋯S π-hole spodium bonding. Each of the coordination polymers is connected into a supramolecular layer. For the methoxy derivative, the layer features π(cyclobutene)⋯π(phenyl) stacking and side-on C<img>O⋯π(cyclobutene)/anti-parallel carbonyl⋯carbonyl interactions. For the ethoxy species, Hg⋯S, offset π(cyclobutene)⋯π(cyclobutene) stacking and C<img>O⋯π(cyclobutene) interactions occur within the layer. In each case, weak C–H⋯π interactions operate between the two-dimensional arrays. The nature of the electron transfer responsible for the spodium/chalcogen bonding has been established. In terms of QTAIM energies, those associated with Hg⋯O σ-hole spodium bonds were in the range of 17.5 to 23.3 kJ mol<small><sup>−1</sup></small>, which were less than the energies computed for the intramolecular Hg⋯O π-hole spodium bonds in each case (31.0 to 43.6 kJ mol<small><sup>−1</sup></small>). The lowest energies for the intermolecular Hg⋯O spodium bonding were computed for the ethoxy species, which correlates with the compensating Hg⋯S π-hole spodium bonding (2 × 11.0 kJ mol<small><sup>−1</sup></small>) and O⋯S chalcogen bonding (12.5 kJ mol<small><sup>−1</sup></small>). The electron transfer leading to the Hg⋯O/S spodium bonding involves donation of an oxygen- or sulphur-bound lone pair of electrons to the σ*(Hg–C) orbital, with the intramolecular Hg⋯O spodium bond involving two lone pair interactions. The O⋯S chalcogen bond is assigned to LP(O) → σ*(C–S).</p>\",\"PeriodicalId\":70,\"journal\":{\"name\":\"CrystEngComm\",\"volume\":\" 1\",\"pages\":\" 64-80\"},\"PeriodicalIF\":2.6000,\"publicationDate\":\"2024-11-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"CrystEngComm\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://pubs.rsc.org/en/content/articlelanding/2025/ce/d4ce00879k\",\"RegionNum\":3,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"CrystEngComm","FirstCategoryId":"92","ListUrlMain":"https://pubs.rsc.org/en/content/articlelanding/2025/ce/d4ce00879k","RegionNum":3,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
On the nature and interplay of Hg⋯O/S spodium bonding and O⋯S chalcogen bonding in one-dimensional phenylmercury(ii) 3-alkoxycyclobutene-1,2-dione-4-thiolate coordination polymers†
Two one-dimensional coordination polymers, PhHg(3-alkoxycyclobutene-1,2-dione-4-thiolate) (alkoxy = OMe and OEt), have been synthesised, characterised spectroscopically, crystallographically and through computational chemistry techniques. Both species exhibit intermolecular Hg⋯O σ-hole spodium bonding as well as intramolecular Hg⋯O π-hole spodium bonding. In the ethoxy species there are complementary σ-hole O⋯S chalcogen bonds to the Hg⋯O σ-hole spodium bonding as well as orthogonal Hg⋯S π-hole spodium bonding. Each of the coordination polymers is connected into a supramolecular layer. For the methoxy derivative, the layer features π(cyclobutene)⋯π(phenyl) stacking and side-on CO⋯π(cyclobutene)/anti-parallel carbonyl⋯carbonyl interactions. For the ethoxy species, Hg⋯S, offset π(cyclobutene)⋯π(cyclobutene) stacking and CO⋯π(cyclobutene) interactions occur within the layer. In each case, weak C–H⋯π interactions operate between the two-dimensional arrays. The nature of the electron transfer responsible for the spodium/chalcogen bonding has been established. In terms of QTAIM energies, those associated with Hg⋯O σ-hole spodium bonds were in the range of 17.5 to 23.3 kJ mol−1, which were less than the energies computed for the intramolecular Hg⋯O π-hole spodium bonds in each case (31.0 to 43.6 kJ mol−1). The lowest energies for the intermolecular Hg⋯O spodium bonding were computed for the ethoxy species, which correlates with the compensating Hg⋯S π-hole spodium bonding (2 × 11.0 kJ mol−1) and O⋯S chalcogen bonding (12.5 kJ mol−1). The electron transfer leading to the Hg⋯O/S spodium bonding involves donation of an oxygen- or sulphur-bound lone pair of electrons to the σ*(Hg–C) orbital, with the intramolecular Hg⋯O spodium bond involving two lone pair interactions. The O⋯S chalcogen bond is assigned to LP(O) → σ*(C–S).