MDMNet:在心肺运动测试中识别器官系统限制的多维多模态网络。

IF 4.9 2区 医学 Q1 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Qin Wang, Wei Fan, Mingshan Li, Yuanyuan Wang, Yi Guo
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引用次数: 0

摘要

背景和目的:心肺运动测试(CPET)是一种综合全面的心肺功能评估工具。在本文中,我们提出了一种新颖的多维多模态网络(MDMNet),用于通过 CPET 识别器官系统的功能限制,这在临床实践中具有重要意义,但由于(1)变量内部错综复杂的关联,以及(2)个体间显著的变异性,因此是一项具有挑战性的任务:所提出的模型有三个引人注目的特点。首先,我们为 CPET 数据采用了专门的嵌入策略,将原始输入映射到学习的嵌入空间,从而促进了生理变量潜在特征的检测。其次,我们设计了一个新颖的多维特征提取模块来捕捉不同维度生理输入的丰富特征,该模块包括一个一维特征提取分支和一个二维特征提取分支,一维特征提取分支可展开整个数据的时间和空间模式,而二维特征提取分支基于格拉米安角场(GAF)编码,可揭示变量内时间点之间复杂的时间相关关系。第三,我们将这些技术与具有临床意义的人口信息相结合,建立了我们的 MDMNet,将多维与多模态学习结合起来,从而进一步同时解决变量内复杂关联和个体间变异性的问题:我们在公开的 CPET 数据集上对所提出的方法进行了评估,三个任务的 AUC 分别为 0.948、0.949 和 0.931:通过偏最小二乘判别分析,进一步证明了我们的方法在辨别个体间差异方面的优越性,这为 CPET 的自动化临床应用提供了巨大潜力。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
MDMNet: Multi-dimensional multi-modal network to identify organ system limitation in cardiopulmonary exercise testing.

Background and objective: Cardiopulmonary exercise testing (CPET) serves as an integrative and comprehensive assessment tool for cardiorespiratory fitness. In this paper, we present a novel multi-dimensional multi-modal network (MDMNet) to identify functional limitation of organ systems via CPET, which is of great importance in clinical practice and yet a challenging task due to (1) the intricate intra-variable associations, and (2) the significant inter-individual variability.

Methods: The proposed model has three compelling characteristics. First, we employ a dedicated embedding strategy for CPET data to map raw inputs into the learned embedding space, facilitating the detection of latent features of physiological variables. Second, we devise a novel multi-dimensional feature extraction module to capture rich features of physiological inputs at different dimensions, which consists of a one-dimensional feature extraction branch unfolding both temporal and spatial patterns of the entire data, and a two-dimensional feature extraction branch based on Gramian Angular Field (GAF) encoding to reveal the complicated temporal correlation relationships between time points within a variable. Third, we integrate these techniques with clinically significant demographic information to establish our MDMNet incorporating multi-dimensional with multi-modal learning, thereby further addressing the issues of complex intra-variable associations and inter-individual variability simultaneously.

Results: We evaluated the proposed method on the publicly available CPET dataset, achieving AUC scores of 0.948, 0.949 and 0.931 for three tasks respectively.

Conclusions: The superiority of our method in discerning inter-individual differences was further demonstrated through partial least squares discriminant analysis, which holds significant potential for automated clinical application of CPET.

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来源期刊
Computer methods and programs in biomedicine
Computer methods and programs in biomedicine 工程技术-工程:生物医学
CiteScore
12.30
自引率
6.60%
发文量
601
审稿时长
135 days
期刊介绍: To encourage the development of formal computing methods, and their application in biomedical research and medical practice, by illustration of fundamental principles in biomedical informatics research; to stimulate basic research into application software design; to report the state of research of biomedical information processing projects; to report new computer methodologies applied in biomedical areas; the eventual distribution of demonstrable software to avoid duplication of effort; to provide a forum for discussion and improvement of existing software; to optimize contact between national organizations and regional user groups by promoting an international exchange of information on formal methods, standards and software in biomedicine. Computer Methods and Programs in Biomedicine covers computing methodology and software systems derived from computing science for implementation in all aspects of biomedical research and medical practice. It is designed to serve: biochemists; biologists; geneticists; immunologists; neuroscientists; pharmacologists; toxicologists; clinicians; epidemiologists; psychiatrists; psychologists; cardiologists; chemists; (radio)physicists; computer scientists; programmers and systems analysts; biomedical, clinical, electrical and other engineers; teachers of medical informatics and users of educational software.
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