{"title":"DART:距离辅助递归测试。","authors":"Xuechan Li, Anthony D Sung, Jichun Xie","doi":"","DOIUrl":null,"url":null,"abstract":"<p><p>Multiple testing is a commonly used tool in modern data science. Sometimes, the hypotheses are embedded in a space; the distances between the hypotheses reflect their co-null/co-alternative patterns. Properly incorporating the distance information in testing will boost testing power. Hence, we developed a new multiple testing framework named Distance Assisted Recursive Testing (DART). DART features in joint artificial intelligence (AI) and statistics modeling. It has two stages. The first stage uses AI models to construct an aggregation tree that reflects the distance information. The second stage uses statistical models to embed the testing on the tree and control the false discovery rate. Theoretical analysis and numerical experiments demonstrated that DART generates valid, robust, and powerful results. We applied DART to a clinical trial in the allogeneic stem cell transplantation study to identify the gut microbiota whose abundance was impacted by post-transplant care.</p>","PeriodicalId":50161,"journal":{"name":"Journal of Machine Learning Research","volume":"24 ","pages":""},"PeriodicalIF":4.3000,"publicationDate":"2023-01-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636646/pdf/","citationCount":"0","resultStr":"{\"title\":\"DART: Distance Assisted Recursive Testing.\",\"authors\":\"Xuechan Li, Anthony D Sung, Jichun Xie\",\"doi\":\"\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Multiple testing is a commonly used tool in modern data science. Sometimes, the hypotheses are embedded in a space; the distances between the hypotheses reflect their co-null/co-alternative patterns. Properly incorporating the distance information in testing will boost testing power. Hence, we developed a new multiple testing framework named Distance Assisted Recursive Testing (DART). DART features in joint artificial intelligence (AI) and statistics modeling. It has two stages. The first stage uses AI models to construct an aggregation tree that reflects the distance information. The second stage uses statistical models to embed the testing on the tree and control the false discovery rate. Theoretical analysis and numerical experiments demonstrated that DART generates valid, robust, and powerful results. We applied DART to a clinical trial in the allogeneic stem cell transplantation study to identify the gut microbiota whose abundance was impacted by post-transplant care.</p>\",\"PeriodicalId\":50161,\"journal\":{\"name\":\"Journal of Machine Learning Research\",\"volume\":\"24 \",\"pages\":\"\"},\"PeriodicalIF\":4.3000,\"publicationDate\":\"2023-01-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11636646/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Machine Learning Research\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"\",\"RegionNum\":3,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"AUTOMATION & CONTROL SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Machine Learning Research","FirstCategoryId":"94","ListUrlMain":"","RegionNum":3,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"AUTOMATION & CONTROL SYSTEMS","Score":null,"Total":0}
Multiple testing is a commonly used tool in modern data science. Sometimes, the hypotheses are embedded in a space; the distances between the hypotheses reflect their co-null/co-alternative patterns. Properly incorporating the distance information in testing will boost testing power. Hence, we developed a new multiple testing framework named Distance Assisted Recursive Testing (DART). DART features in joint artificial intelligence (AI) and statistics modeling. It has two stages. The first stage uses AI models to construct an aggregation tree that reflects the distance information. The second stage uses statistical models to embed the testing on the tree and control the false discovery rate. Theoretical analysis and numerical experiments demonstrated that DART generates valid, robust, and powerful results. We applied DART to a clinical trial in the allogeneic stem cell transplantation study to identify the gut microbiota whose abundance was impacted by post-transplant care.
期刊介绍:
The Journal of Machine Learning Research (JMLR) provides an international forum for the electronic and paper publication of high-quality scholarly articles in all areas of machine learning. All published papers are freely available online.
JMLR has a commitment to rigorous yet rapid reviewing.
JMLR seeks previously unpublished papers on machine learning that contain:
new principled algorithms with sound empirical validation, and with justification of theoretical, psychological, or biological nature;
experimental and/or theoretical studies yielding new insight into the design and behavior of learning in intelligent systems;
accounts of applications of existing techniques that shed light on the strengths and weaknesses of the methods;
formalization of new learning tasks (e.g., in the context of new applications) and of methods for assessing performance on those tasks;
development of new analytical frameworks that advance theoretical studies of practical learning methods;
computational models of data from natural learning systems at the behavioral or neural level; or extremely well-written surveys of existing work.