人类心脏的自组织网络表示。

IF 2.7 2区 数学 Q1 MATHEMATICS, APPLIED
Chaos Pub Date : 2024-12-01 DOI:10.1063/5.0243391
Runsang Liu, Hui Yang
{"title":"人类心脏的自组织网络表示。","authors":"Runsang Liu, Hui Yang","doi":"10.1063/5.0243391","DOIUrl":null,"url":null,"abstract":"<p><p>Network represents adjacent relationships, connections, and interactions among constituent elements in complex systems but often loses critical information about spatial configurations. However, structure-function relationships in biological systems, e.g., the human heart, are highly dependent on both connectivity relationships and geometric details. Therefore, this paper presents a new self-organizing approach to derive the geometric structure from a network representation of the heart. We propose to simulate the network as a physical system, where nodes are treated as charged particles and edges as springs and then let these nodes self-organize to reconstruct geometric details. Despite random initiations, this network evolves into a steady topology when its energy is minimized. This study addresses the open question, i.e., \"whether a network representation can effectively resemble spatial geometry of a biological system,\" thereby paving a stepstone to leverage network theory to investigate disease-altered biological functions.</p>","PeriodicalId":9974,"journal":{"name":"Chaos","volume":"34 12","pages":""},"PeriodicalIF":2.7000,"publicationDate":"2024-12-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11614475/pdf/","citationCount":"0","resultStr":"{\"title\":\"Self-organizing network representation of human heart.\",\"authors\":\"Runsang Liu, Hui Yang\",\"doi\":\"10.1063/5.0243391\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Network represents adjacent relationships, connections, and interactions among constituent elements in complex systems but often loses critical information about spatial configurations. However, structure-function relationships in biological systems, e.g., the human heart, are highly dependent on both connectivity relationships and geometric details. Therefore, this paper presents a new self-organizing approach to derive the geometric structure from a network representation of the heart. We propose to simulate the network as a physical system, where nodes are treated as charged particles and edges as springs and then let these nodes self-organize to reconstruct geometric details. Despite random initiations, this network evolves into a steady topology when its energy is minimized. This study addresses the open question, i.e., \\\"whether a network representation can effectively resemble spatial geometry of a biological system,\\\" thereby paving a stepstone to leverage network theory to investigate disease-altered biological functions.</p>\",\"PeriodicalId\":9974,\"journal\":{\"name\":\"Chaos\",\"volume\":\"34 12\",\"pages\":\"\"},\"PeriodicalIF\":2.7000,\"publicationDate\":\"2024-12-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11614475/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Chaos\",\"FirstCategoryId\":\"100\",\"ListUrlMain\":\"https://doi.org/10.1063/5.0243391\",\"RegionNum\":2,\"RegionCategory\":\"数学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"MATHEMATICS, APPLIED\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Chaos","FirstCategoryId":"100","ListUrlMain":"https://doi.org/10.1063/5.0243391","RegionNum":2,"RegionCategory":"数学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"MATHEMATICS, APPLIED","Score":null,"Total":0}
引用次数: 0

摘要

网络代表了复杂系统中组成元素之间的相邻关系、联系和相互作用,但往往会丢失有关空间结构的关键信息。然而,生物系统中的结构-功能关系,例如人类心脏,高度依赖于连接关系和几何细节。因此,本文提出了一种新的自组织方法,从心脏的网络表示中导出几何结构。我们建议将网络模拟为一个物理系统,其中节点被视为带电粒子,边缘被视为弹簧,然后让这些节点自组织来重建几何细节。尽管初始是随机的,但当能量最小时,该网络演化为稳定的拓扑结构。这项研究解决了一个悬而未决的问题,即“网络表示是否可以有效地类似于生物系统的空间几何”,从而为利用网络理论来研究疾病改变的生物功能奠定了基础。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Self-organizing network representation of human heart.

Network represents adjacent relationships, connections, and interactions among constituent elements in complex systems but often loses critical information about spatial configurations. However, structure-function relationships in biological systems, e.g., the human heart, are highly dependent on both connectivity relationships and geometric details. Therefore, this paper presents a new self-organizing approach to derive the geometric structure from a network representation of the heart. We propose to simulate the network as a physical system, where nodes are treated as charged particles and edges as springs and then let these nodes self-organize to reconstruct geometric details. Despite random initiations, this network evolves into a steady topology when its energy is minimized. This study addresses the open question, i.e., "whether a network representation can effectively resemble spatial geometry of a biological system," thereby paving a stepstone to leverage network theory to investigate disease-altered biological functions.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Chaos
Chaos 物理-物理:数学物理
CiteScore
5.20
自引率
13.80%
发文量
448
审稿时长
2.3 months
期刊介绍: Chaos: An Interdisciplinary Journal of Nonlinear Science is a peer-reviewed journal devoted to increasing the understanding of nonlinear phenomena and describing the manifestations in a manner comprehensible to researchers from a broad spectrum of disciplines.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信