Zongyou Cai , Zhangnan Zhong , Haiwei Lin , Bingsheng Huang , Ziyue Xu , Bin Huang , Wei Deng , Qiting Wu , Kaixin Lei , Jiegeng Lyu , Yufeng Ye , Hanwei Chen , Jian Zhang
{"title":"在双序列磁共振成像上进行自我监督学习以自动分割鼻咽癌","authors":"Zongyou Cai , Zhangnan Zhong , Haiwei Lin , Bingsheng Huang , Ziyue Xu , Bin Huang , Wei Deng , Qiting Wu , Kaixin Lei , Jiegeng Lyu , Yufeng Ye , Hanwei Chen , Jian Zhang","doi":"10.1016/j.compmedimag.2024.102471","DOIUrl":null,"url":null,"abstract":"<div><div>Automating the segmentation of nasopharyngeal carcinoma (NPC) is crucial for therapeutic procedures but presents challenges given the hurdles in amassing extensively annotated datasets. Although previous studies have applied self-supervised learning to capitalize on unlabeled data to improve segmentation performance, these methods often overlooked the benefits of dual-sequence magnetic resonance imaging (MRI). In the present study, we incorporated self-supervised learning with a saliency transformation module using unlabeled dual-sequence MRI for accurate NPC segmentation. 44 labeled and 72 unlabeled patients were collected to develop and evaluate our network. Impressively, our network achieved a mean Dice similarity coefficient (DSC) of 0.77, which is consistent with a previous study that relied on a training set of 4,100 annotated cases. The results further revealed that our approach required minimal adjustments, primarily <span><math><mo><</mo></math></span> 20% tweak in the DSC, to meet clinical standards. By enhancing the automatic segmentation of NPC, our method alleviates the annotation burden on oncologists, curbs subjectivity, and ensures reliable NPC delineation.</div></div>","PeriodicalId":50631,"journal":{"name":"Computerized Medical Imaging and Graphics","volume":"118 ","pages":"Article 102471"},"PeriodicalIF":5.4000,"publicationDate":"2024-11-22","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Self-supervised learning on dual-sequence magnetic resonance imaging for automatic segmentation of nasopharyngeal carcinoma\",\"authors\":\"Zongyou Cai , Zhangnan Zhong , Haiwei Lin , Bingsheng Huang , Ziyue Xu , Bin Huang , Wei Deng , Qiting Wu , Kaixin Lei , Jiegeng Lyu , Yufeng Ye , Hanwei Chen , Jian Zhang\",\"doi\":\"10.1016/j.compmedimag.2024.102471\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Automating the segmentation of nasopharyngeal carcinoma (NPC) is crucial for therapeutic procedures but presents challenges given the hurdles in amassing extensively annotated datasets. Although previous studies have applied self-supervised learning to capitalize on unlabeled data to improve segmentation performance, these methods often overlooked the benefits of dual-sequence magnetic resonance imaging (MRI). In the present study, we incorporated self-supervised learning with a saliency transformation module using unlabeled dual-sequence MRI for accurate NPC segmentation. 44 labeled and 72 unlabeled patients were collected to develop and evaluate our network. Impressively, our network achieved a mean Dice similarity coefficient (DSC) of 0.77, which is consistent with a previous study that relied on a training set of 4,100 annotated cases. The results further revealed that our approach required minimal adjustments, primarily <span><math><mo><</mo></math></span> 20% tweak in the DSC, to meet clinical standards. By enhancing the automatic segmentation of NPC, our method alleviates the annotation burden on oncologists, curbs subjectivity, and ensures reliable NPC delineation.</div></div>\",\"PeriodicalId\":50631,\"journal\":{\"name\":\"Computerized Medical Imaging and Graphics\",\"volume\":\"118 \",\"pages\":\"Article 102471\"},\"PeriodicalIF\":5.4000,\"publicationDate\":\"2024-11-22\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Computerized Medical Imaging and Graphics\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0895611124001484\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"ENGINEERING, BIOMEDICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Computerized Medical Imaging and Graphics","FirstCategoryId":"5","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0895611124001484","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"ENGINEERING, BIOMEDICAL","Score":null,"Total":0}
Self-supervised learning on dual-sequence magnetic resonance imaging for automatic segmentation of nasopharyngeal carcinoma
Automating the segmentation of nasopharyngeal carcinoma (NPC) is crucial for therapeutic procedures but presents challenges given the hurdles in amassing extensively annotated datasets. Although previous studies have applied self-supervised learning to capitalize on unlabeled data to improve segmentation performance, these methods often overlooked the benefits of dual-sequence magnetic resonance imaging (MRI). In the present study, we incorporated self-supervised learning with a saliency transformation module using unlabeled dual-sequence MRI for accurate NPC segmentation. 44 labeled and 72 unlabeled patients were collected to develop and evaluate our network. Impressively, our network achieved a mean Dice similarity coefficient (DSC) of 0.77, which is consistent with a previous study that relied on a training set of 4,100 annotated cases. The results further revealed that our approach required minimal adjustments, primarily 20% tweak in the DSC, to meet clinical standards. By enhancing the automatic segmentation of NPC, our method alleviates the annotation burden on oncologists, curbs subjectivity, and ensures reliable NPC delineation.
期刊介绍:
The purpose of the journal Computerized Medical Imaging and Graphics is to act as a source for the exchange of research results concerning algorithmic advances, development, and application of digital imaging in disease detection, diagnosis, intervention, prevention, precision medicine, and population health. Included in the journal will be articles on novel computerized imaging or visualization techniques, including artificial intelligence and machine learning, augmented reality for surgical planning and guidance, big biomedical data visualization, computer-aided diagnosis, computerized-robotic surgery, image-guided therapy, imaging scanning and reconstruction, mobile and tele-imaging, radiomics, and imaging integration and modeling with other information relevant to digital health. The types of biomedical imaging include: magnetic resonance, computed tomography, ultrasound, nuclear medicine, X-ray, microwave, optical and multi-photon microscopy, video and sensory imaging, and the convergence of biomedical images with other non-imaging datasets.