一种基因编码的具有氧化还原活性的烟酰胺氨基酸。

IF 2.9 3区 生物学 Q3 BIOCHEMISTRY & MOLECULAR BIOLOGY
Biochemistry Biochemistry Pub Date : 2024-12-17 Epub Date: 2024-11-25 DOI:10.1021/acs.biochem.4c00530
Michael L Pigula, Yahui Ban, Hengyao You, Peter G Schultz
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引用次数: 0

摘要

含烟酰胺的辅助因子在许多催化双电子氧化还原反应的酶中发挥着重要作用。然而,由于辅助因子-蛋白质界面的延伸性质以及有效地将电子转移到底物或从底物转移到电子所需的烟酰胺分子的精确取向,很难将烟酰胺结合位点设计到蛋白质中。为了应对这些挑战,我们对细菌中带有烟酰胺侧链的非典型氨基酸(ncAA)进行了基因编码。这种具有氧化还原活性的氨基酸被称为 Nic1,具有与天然辅助因子烟酰胺腺嘌呤二核苷酸(NAD+)相似的电化学特性。无论是在溶液中还是与模型蛋白质结合后,Nic1 都能利用化学试剂进行可逆还原和氧化。这种可通过基因编码的辅助因子能以特定位点的方式被引入蛋白质中,可作为研究酶中电子传递机制和设计氧化还原活性蛋白质的工具。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A Genetically Encoded Redox-Active Nicotinamide Amino Acid.

Nicotinamide-containing cofactors play an essential role in many enzymes that catalyze two-electron redox reactions. However, it is difficult to engineer nicotinamide binding sites into proteins due to the extended nature of the cofactor-protein interface and the precise orientation of the nicotinamide moiety required for efficient electron transfer to or from the substrate. To address these challenges, we genetically encoded a noncanonical amino acid (ncAA) bearing a nicotinamide side chain in bacteria. This redox-active amino acid, termed Nic1, exhibits similar electrochemical properties to the natural cofactor nicotinamide adenine dinucleotide (NAD+). Nic1 can be reversibly reduced and oxidized using chemical reagents both free in solution and when incorporated into a model protein. This genetically encodable cofactor can be introduced into proteins in a site-specific fashion and may serve as a tool to study electron-transfer mechanisms in enzymes and to engineer redox-active proteins.

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来源期刊
Biochemistry Biochemistry
Biochemistry Biochemistry 生物-生化与分子生物学
CiteScore
5.50
自引率
3.40%
发文量
336
审稿时长
1-2 weeks
期刊介绍: Biochemistry provides an international forum for publishing exceptional, rigorous, high-impact research across all of biological chemistry. This broad scope includes studies on the chemical, physical, mechanistic, and/or structural basis of biological or cell function, and encompasses the fields of chemical biology, synthetic biology, disease biology, cell biology, nucleic acid biology, neuroscience, structural biology, and biophysics. In addition to traditional Research Articles, Biochemistry also publishes Communications, Viewpoints, and Perspectives, as well as From the Bench articles that report new methods of particular interest to the biological chemistry community.
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