Joshua J Levy, Alos B Diallo, Marietta K Saldias Montivero, Sameer Gabbita, Lucas A Salas, Brock C Christensen
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引用次数: 0
摘要
在过去的一个世纪里,人类的寿命显著延长,但衰老仍然不可避免。生物年龄反映了病理衰退和疾病,而计时年龄则表明了正常衰老,两者之间的差异推动了先前的研究,这些研究的重点是确定可为干预措施提供信息的机制,以逆转与年龄相关的过度衰退并降低发病率和死亡率。DNA 甲基化已成为预测年龄的一个重要指标,从而推动了表观遗传时钟的发展,该时钟可量化病理恶化的程度,使其超出特定年龄的正常预期。机器学习技术通过进一步阐明生物年龄和计时年龄之间的差距,为增进我们对衰老生物机制的了解提供了一条大有可为的途径。这篇透视文章研究了当前表观遗传时钟的算法方法,探讨了如何利用机器学习从 DNA 甲基化中估算年龄,并讨论了如何完善 ML 方法的解释并针对特定患者群体和细胞类型调整其推论,从而扩大这些技术在年龄预测中的效用。通过利用机器学习的洞察力,我们完全有能力有效地调整、定制和个性化针对衰老的干预措施。
Insights to aging prediction with AI based epigenetic clocks.
Over the past century, human lifespan has increased remarkably, yet the inevitability of aging persists. The disparity between biological age, which reflects pathological deterioration and disease, and chronological age, indicative of normal aging, has driven prior research focused on identifying mechanisms that could inform interventions to reverse excessive age-related deterioration and reduce morbidity and mortality. DNA methylation has emerged as an important predictor of age, leading to the development of epigenetic clocks that quantify the extent of pathological deterioration beyond what is typically expected for a given age. Machine learning technologies offer promising avenues to enhance our understanding of the biological mechanisms governing aging by further elucidating the gap between biological and chronological ages. This perspective article examines current algorithmic approaches to epigenetic clocks, explores the use of machine learning for age estimation from DNA methylation, and discusses how refining the interpretation of ML methods and tailoring their inferences for specific patient populations and cell types can amplify the utility of these technologies in age prediction. By harnessing insights from machine learning, we are well-positioned to effectively adapt, customize and personalize interventions aimed at aging.
期刊介绍:
Epigenomics provides the forum to address the rapidly progressing research developments in this ever-expanding field; to report on the major challenges ahead and critical advances that are propelling the science forward. The journal delivers this information in concise, at-a-glance article formats – invaluable to a time constrained community.
Substantial developments in our current knowledge and understanding of genomics and epigenetics are constantly being made, yet this field is still in its infancy. Epigenomics provides a critical overview of the latest and most significant advances as they unfold and explores their potential application in the clinical setting.