Hengameh Feyzbakhsh Markhali , Hadi Habibollahi , Mohammad Reza Safari Motlagh , Behzad Kaviani , Cesar Augusto Roque-Borda
{"title":"金黄色葡萄球菌分离株中 Tn916 转座子的遗传多样性及其与四环素耐药性的关系","authors":"Hengameh Feyzbakhsh Markhali , Hadi Habibollahi , Mohammad Reza Safari Motlagh , Behzad Kaviani , Cesar Augusto Roque-Borda","doi":"10.1016/j.egg.2024.100306","DOIUrl":null,"url":null,"abstract":"<div><div><em>Staphylococcus aureus,</em> a major pathogen responsible for hospital-acquired infections, poses a severe global health threat due to its virulence and increasing antimicrobial resistance. This study confirmed the presence of the <em>tet(M)</em> gene and the Tn<em>916</em> transposon in tetracycline-resistant <em>S. aureus</em> isolates<em>.</em> We explored genetic polymorphism by analyzing the positions of Tn<em>916</em> and Shine-Dalgarno sequences in 30 pathogenic <em>S. aureus</em> isolates. Antibiotic resistance profiles against five antibiotics, including tetracycline, were assessed using disc diffusion methods. PCR was utilized to detect the presence of the <em>tet(M) gene</em> and Tn<em>916</em> transposon, and sequence sizes between these genetic elements were determined using specific primers. The resulting band patterns were converted into a binary matrix, and a phylogenetic tree was constructed using the Past3 software. All <em>S. aureus</em> isolates examined showed tetracycline resistance and contained the <em>tet(M)</em> gene and Tn<em>916</em> transposon. Analysis of the distances between Tn<em>916</em> and Shine-Dalgarno sequences revealed diverse band patterns among the strains. Phylogenetic clustering based on PCR band patterns classified the strains into seven distinct clusters, indicating significant genetic diversity and polymorphism. Molecular docking studies supported our findings, suggesting potential applications in developing effective treatments against <em>S. aureus</em> infections.</div></div>","PeriodicalId":37938,"journal":{"name":"Ecological Genetics and Genomics","volume":"33 ","pages":"Article 100306"},"PeriodicalIF":0.0000,"publicationDate":"2024-11-14","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Genetic diversity of Tn916 transposon and its association with tetracycline resistance in Staphylococcus aureus isolates\",\"authors\":\"Hengameh Feyzbakhsh Markhali , Hadi Habibollahi , Mohammad Reza Safari Motlagh , Behzad Kaviani , Cesar Augusto Roque-Borda\",\"doi\":\"10.1016/j.egg.2024.100306\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div><em>Staphylococcus aureus,</em> a major pathogen responsible for hospital-acquired infections, poses a severe global health threat due to its virulence and increasing antimicrobial resistance. This study confirmed the presence of the <em>tet(M)</em> gene and the Tn<em>916</em> transposon in tetracycline-resistant <em>S. aureus</em> isolates<em>.</em> We explored genetic polymorphism by analyzing the positions of Tn<em>916</em> and Shine-Dalgarno sequences in 30 pathogenic <em>S. aureus</em> isolates. Antibiotic resistance profiles against five antibiotics, including tetracycline, were assessed using disc diffusion methods. PCR was utilized to detect the presence of the <em>tet(M) gene</em> and Tn<em>916</em> transposon, and sequence sizes between these genetic elements were determined using specific primers. The resulting band patterns were converted into a binary matrix, and a phylogenetic tree was constructed using the Past3 software. All <em>S. aureus</em> isolates examined showed tetracycline resistance and contained the <em>tet(M)</em> gene and Tn<em>916</em> transposon. Analysis of the distances between Tn<em>916</em> and Shine-Dalgarno sequences revealed diverse band patterns among the strains. Phylogenetic clustering based on PCR band patterns classified the strains into seven distinct clusters, indicating significant genetic diversity and polymorphism. Molecular docking studies supported our findings, suggesting potential applications in developing effective treatments against <em>S. aureus</em> infections.</div></div>\",\"PeriodicalId\":37938,\"journal\":{\"name\":\"Ecological Genetics and Genomics\",\"volume\":\"33 \",\"pages\":\"Article 100306\"},\"PeriodicalIF\":0.0000,\"publicationDate\":\"2024-11-14\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Ecological Genetics and Genomics\",\"FirstCategoryId\":\"1085\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S2405985424000909\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q3\",\"JCRName\":\"Agricultural and Biological Sciences\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Ecological Genetics and Genomics","FirstCategoryId":"1085","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S2405985424000909","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q3","JCRName":"Agricultural and Biological Sciences","Score":null,"Total":0}
Genetic diversity of Tn916 transposon and its association with tetracycline resistance in Staphylococcus aureus isolates
Staphylococcus aureus, a major pathogen responsible for hospital-acquired infections, poses a severe global health threat due to its virulence and increasing antimicrobial resistance. This study confirmed the presence of the tet(M) gene and the Tn916 transposon in tetracycline-resistant S. aureus isolates. We explored genetic polymorphism by analyzing the positions of Tn916 and Shine-Dalgarno sequences in 30 pathogenic S. aureus isolates. Antibiotic resistance profiles against five antibiotics, including tetracycline, were assessed using disc diffusion methods. PCR was utilized to detect the presence of the tet(M) gene and Tn916 transposon, and sequence sizes between these genetic elements were determined using specific primers. The resulting band patterns were converted into a binary matrix, and a phylogenetic tree was constructed using the Past3 software. All S. aureus isolates examined showed tetracycline resistance and contained the tet(M) gene and Tn916 transposon. Analysis of the distances between Tn916 and Shine-Dalgarno sequences revealed diverse band patterns among the strains. Phylogenetic clustering based on PCR band patterns classified the strains into seven distinct clusters, indicating significant genetic diversity and polymorphism. Molecular docking studies supported our findings, suggesting potential applications in developing effective treatments against S. aureus infections.
期刊介绍:
Ecological Genetics and Genomics publishes ecological studies of broad interest that provide significant insight into ecological interactions or/ and species diversification. New data in these areas are published as research papers, or methods and resource reports that provide novel information on technologies or tools that will be of interest to a broad readership. Complete data sets are shared where appropriate. The journal also provides Reviews, and Perspectives articles, which present commentary on the latest advances published both here and elsewhere, placing such progress in its broader biological context. Topics include: -metagenomics -population genetics/genomics -evolutionary ecology -conservation and molecular adaptation -speciation genetics -environmental and marine genomics -ecological simulation -genomic divergence of organisms