Shun-Qin Zeng , Ying-Hong Ma , Juan Lu , Dan-Dan Kong , Zi-Xuan Zhao , Xiang-Yuan Li , Na Li , Jing Xue , Chin-Ho Chen , Zi-Jian Zhao , Xian-Jin Wu , Gang Zhang , Yuan-Xiang Li , Qiong-Yu Zou , Yi-Min Li , Hai-Feng Wu
{"title":"利用 UPLC-QTOF-MS/MS、DFT 计算、对接和分子动力学研究鉴定白花蛇舌草中的抗艾滋病毒环己烷三萜类化合物","authors":"Shun-Qin Zeng , Ying-Hong Ma , Juan Lu , Dan-Dan Kong , Zi-Xuan Zhao , Xiang-Yuan Li , Na Li , Jing Xue , Chin-Ho Chen , Zi-Jian Zhao , Xian-Jin Wu , Gang Zhang , Yuan-Xiang Li , Qiong-Yu Zou , Yi-Min Li , Hai-Feng Wu","doi":"10.1016/j.molstruc.2024.140706","DOIUrl":null,"url":null,"abstract":"<div><div>Structurally diverse triterpenoids have shown potential as pharmaceutical precursors for HIV treatment. Our previous research led to the discovery of a potent antiviral cycloartane triterpenoid derivative, (20<em>S</em>,24<em>S</em>)-15<em>β</em>,16<em>β</em>-diacetoxy-18,24;20,24-diepoxy-9,19-cyclolanostane-3<em>β</em>,25-diol 3-<em>O</em>-3′,3′-dimethyl succinate (DSC) derived from the triterpene glycoside beesioside I, exhibiting high-affinity interactions with the Capsid (CA) and spacer peptide 1 (SP1) domain (CA-SP1) region of the HIV Gag polyprotein. To discover new antiviral agents from natural resources, the methanolic extracts of <em>Actaea vaginata</em> were qualitatively analyzed using UPLC-QTOF-MS/MS. Based on characteristic ESIMS/MS fragmentations of cycloartane triterpenoids obtained from <em>A. vaginata</em> and relevant literature, twenty-one compounds including an unknown triterpenoid (<strong>1</strong>) were identified. Guided by LC-MS analysis, compound <strong>1</strong> was isolated and determined as (20<em>S</em>,24<em>S</em>)-15<em>β,</em>16<em>β</em>-diacetoxy-18,24;20,24-diepoxy-9,19-cyclanostane-3<em>β</em>,25-diol-3-<em>O</em>-<em>β</em>-<span>d</span>-xylopyranosyl-25-<em>O</em>-<em>β</em>-<span>d</span>-glucopyranoside by spectroscopic methods, showing moderate antiviral activity with an EC<sub>50</sub> value of 8.6 µM against HIV-1<sub>NL-43</sub> in MT4 cells. The structural data and electronic properties of compound <strong>1</strong> were determined using the B3LYP density functional method with the basis set 6–311+<em>G</em>(d,p). To further understand the compound's antiviral quality, molecular docking and molecular dynamics studies were conducted. The results indicated that compound <strong>1</strong> could be a potential candidate for anti-HIV treatment.</div></div>","PeriodicalId":16414,"journal":{"name":"Journal of Molecular Structure","volume":"1322 ","pages":"Article 140706"},"PeriodicalIF":4.0000,"publicationDate":"2024-11-10","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Identification of anti-HIV cycloartane triterpenoids from Actaea vaginata using UPLC‐QTOF‐MS/MS, DFT calculations, docking, and molecular dynamics studies\",\"authors\":\"Shun-Qin Zeng , Ying-Hong Ma , Juan Lu , Dan-Dan Kong , Zi-Xuan Zhao , Xiang-Yuan Li , Na Li , Jing Xue , Chin-Ho Chen , Zi-Jian Zhao , Xian-Jin Wu , Gang Zhang , Yuan-Xiang Li , Qiong-Yu Zou , Yi-Min Li , Hai-Feng Wu\",\"doi\":\"10.1016/j.molstruc.2024.140706\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Structurally diverse triterpenoids have shown potential as pharmaceutical precursors for HIV treatment. Our previous research led to the discovery of a potent antiviral cycloartane triterpenoid derivative, (20<em>S</em>,24<em>S</em>)-15<em>β</em>,16<em>β</em>-diacetoxy-18,24;20,24-diepoxy-9,19-cyclolanostane-3<em>β</em>,25-diol 3-<em>O</em>-3′,3′-dimethyl succinate (DSC) derived from the triterpene glycoside beesioside I, exhibiting high-affinity interactions with the Capsid (CA) and spacer peptide 1 (SP1) domain (CA-SP1) region of the HIV Gag polyprotein. To discover new antiviral agents from natural resources, the methanolic extracts of <em>Actaea vaginata</em> were qualitatively analyzed using UPLC-QTOF-MS/MS. Based on characteristic ESIMS/MS fragmentations of cycloartane triterpenoids obtained from <em>A. vaginata</em> and relevant literature, twenty-one compounds including an unknown triterpenoid (<strong>1</strong>) were identified. Guided by LC-MS analysis, compound <strong>1</strong> was isolated and determined as (20<em>S</em>,24<em>S</em>)-15<em>β,</em>16<em>β</em>-diacetoxy-18,24;20,24-diepoxy-9,19-cyclanostane-3<em>β</em>,25-diol-3-<em>O</em>-<em>β</em>-<span>d</span>-xylopyranosyl-25-<em>O</em>-<em>β</em>-<span>d</span>-glucopyranoside by spectroscopic methods, showing moderate antiviral activity with an EC<sub>50</sub> value of 8.6 µM against HIV-1<sub>NL-43</sub> in MT4 cells. The structural data and electronic properties of compound <strong>1</strong> were determined using the B3LYP density functional method with the basis set 6–311+<em>G</em>(d,p). To further understand the compound's antiviral quality, molecular docking and molecular dynamics studies were conducted. The results indicated that compound <strong>1</strong> could be a potential candidate for anti-HIV treatment.</div></div>\",\"PeriodicalId\":16414,\"journal\":{\"name\":\"Journal of Molecular Structure\",\"volume\":\"1322 \",\"pages\":\"Article 140706\"},\"PeriodicalIF\":4.0000,\"publicationDate\":\"2024-11-10\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of Molecular Structure\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S0022286024032149\",\"RegionNum\":2,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"CHEMISTRY, PHYSICAL\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of Molecular Structure","FirstCategoryId":"92","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S0022286024032149","RegionNum":2,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"CHEMISTRY, PHYSICAL","Score":null,"Total":0}
Identification of anti-HIV cycloartane triterpenoids from Actaea vaginata using UPLC‐QTOF‐MS/MS, DFT calculations, docking, and molecular dynamics studies
Structurally diverse triterpenoids have shown potential as pharmaceutical precursors for HIV treatment. Our previous research led to the discovery of a potent antiviral cycloartane triterpenoid derivative, (20S,24S)-15β,16β-diacetoxy-18,24;20,24-diepoxy-9,19-cyclolanostane-3β,25-diol 3-O-3′,3′-dimethyl succinate (DSC) derived from the triterpene glycoside beesioside I, exhibiting high-affinity interactions with the Capsid (CA) and spacer peptide 1 (SP1) domain (CA-SP1) region of the HIV Gag polyprotein. To discover new antiviral agents from natural resources, the methanolic extracts of Actaea vaginata were qualitatively analyzed using UPLC-QTOF-MS/MS. Based on characteristic ESIMS/MS fragmentations of cycloartane triterpenoids obtained from A. vaginata and relevant literature, twenty-one compounds including an unknown triterpenoid (1) were identified. Guided by LC-MS analysis, compound 1 was isolated and determined as (20S,24S)-15β,16β-diacetoxy-18,24;20,24-diepoxy-9,19-cyclanostane-3β,25-diol-3-O-β-d-xylopyranosyl-25-O-β-d-glucopyranoside by spectroscopic methods, showing moderate antiviral activity with an EC50 value of 8.6 µM against HIV-1NL-43 in MT4 cells. The structural data and electronic properties of compound 1 were determined using the B3LYP density functional method with the basis set 6–311+G(d,p). To further understand the compound's antiviral quality, molecular docking and molecular dynamics studies were conducted. The results indicated that compound 1 could be a potential candidate for anti-HIV treatment.
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