西南大西洋主要深水硬骨鱼礁框架工程师的微生物组

IF 2.3 3区 地球科学 Q2 OCEANOGRAPHY
Aline Aparecida Zanotti , Kátia Cristina Cruz Capel , Carla Zilberberg , Marcelo Visentini Kitahara
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引用次数: 0

摘要

深海(150 米)栖息着现存硬骨珊瑚多样性的一半,包括形成珊瑚礁的框架物种。然而,迄今为止,微生物与珊瑚之间的关系主要集中在浅水同类动物身上。在此,我们利用 16S rRNA 基因扩增片测序技术,探索了大西洋深水硬骨珊瑚礁框架工程师(Desmophyllum pertusum、Solenosmilia variabilis、Madrepora oculata 和 Enallopsammia rostrata)的微生物组,并将其与环境特征相关联。本研究中使用的各珊瑚物种的珊瑚群碎片取自巴西东南沿海的三个沉积盆地,包括两个水体(南极中间水体和南大西洋沿岸水体)。虽然代表的硬骨鱼类进化支系相距甚远,有些支系相隔 300 多万年,但我们的研究结果表明,这些支系的微生物特征在分类学上具有同质性。我们确定了物种特有的微生物核心以及所有受检物种共有的核心。这些核心由细菌属组成,而这些细菌属已经在其他珊瑚物种中观察到,包括那些来自变色贝类物种的细菌属。这种模式表明宿主对微生物群落进行了积极的选择,这种现象似乎是全生物体适应性的基础,尤其是在珊瑚等长寿物种中。除了微生物核心之外,对于所有考察物种来说,部分确定的微生物群落是灵活的,并对环境驱动因素做出反应。这种灵活性很可能与宿主在生态时间尺度上的适应能力有关。综合来看,这些全生物体的能力可能是其在生态和地质时间尺度上取得成功的关键。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
The microbiome of the main deep-water scleractinian reef-framework engineers from the Southwestern Atlantic
Deep waters (>150 m) shelter half of the extant diversity of scleractinian corals, including framework reef-forming species. However, to date, the relationship between microorganisms and corals has focused mainly on their zooxanthellate shallow-water counterparts. Here, using 16S rRNA gene amplicon sequencing, we explore the microbiome of all major Atlantic deep-water scleractinian reef framework engineers (Desmophyllum pertusum, Solenosmilia variabilis, Madrepora oculata, and Enallopsammia rostrata), and correlated them with environmental characteristics. Colony fragments of each coral species used in the present study were sampled from three sedimentary basins off the Southeastern coast of Brazil, including two water masses (Antarctic Intermediate Water and South Atlantic Coastal Water). Although representing distant scleractinian evolutionarily lineages, some evolving apart for more than 300Ma, our results suggest a taxonomic homogeneity in their microbial profile. The species-specific microbial core, as well as the core common to all examined species, were identified. Such cores are composed of bacterial genera that have already been observed in other coral species, including those from zooxanthellate species. Such a pattern suggests an active selection of the microbial community by their hosts, a phenomenon that seems to be fundamental for holobiont fitness, especially in long-lived species, such as corals. Besides the microbial core, for all examined species, part of the determined microbiome was flexible and responded to environmental drivers. This flexibility is most probably related to the host's ability to adapt in ecological time scales. Taken together, these holobiont abilities may be crucial to its success in both ecological and geological timescales.
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来源期刊
CiteScore
4.60
自引率
4.20%
发文量
144
审稿时长
18.3 weeks
期刊介绍: Deep-Sea Research Part I: Oceanographic Research Papers is devoted to the publication of the results of original scientific research, including theoretical work of evident oceanographic applicability; and the solution of instrumental or methodological problems with evidence of successful use. The journal is distinguished by its interdisciplinary nature and its breadth, covering the geological, physical, chemical and biological aspects of the ocean and its boundaries with the sea floor and the atmosphere. In addition to regular "Research Papers" and "Instruments and Methods" papers, briefer communications may be published as "Notes". Supplemental matter, such as extensive data tables or graphs and multimedia content, may be published as electronic appendices.
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