Ravinder Sharma , Pamita Awasthi , Neetika Kumari , Manu Vatsal , Arti Sharma , Ritu , Indra Bahadur , Mwadham M. Kabanda , Faruq Mohammad
{"title":"表面活性离子液体 (SAIL) 与某些生物大分子分子相互作用的新见解:实验和计算方法","authors":"Ravinder Sharma , Pamita Awasthi , Neetika Kumari , Manu Vatsal , Arti Sharma , Ritu , Indra Bahadur , Mwadham M. Kabanda , Faruq Mohammad","doi":"10.1016/j.molliq.2024.126457","DOIUrl":null,"url":null,"abstract":"<div><div>Understanding the influence of ionic liquids (ILs) on the solubility of biomolecules in aqueous solutions is crucial for designing and optimizing novel biotechnological processes. However, the molecular-level mechanisms underlying this influence remain inconclusive and not fully elucidated. To contribute toward the understanding of molecular interactions between amino acids and ionic liquid in aqueous media, measurements of the densities and speeds of sound for L-serine and glycyl-L-serine in (0.00, 0.005, 0.01, 0.03, and 0.05) mol·kg<sup>−1</sup> aqueous solutions of 1-octyl-3-methylimidazolium bromide were conducted at T = (288.15, 298.15, 308.15, and 318.15) K. From experimental data various thermodynamics paramours such as apparent molar volume (<em>V<sub>ϕ</sub></em>), the partial molar volume (<span><math><msubsup><mi>V</mi><mi>ϕ</mi><mn>0</mn></msubsup></math></span>), standard partial molar volumes of transfer (<span><math><mrow><mi>Δ</mi><msubsup><mi>V</mi><mi>ϕ</mi><mn>0</mn></msubsup></mrow></math></span>) partial molar isentropic compression (<em>K<sub>ϕ,s</sub></em>) and partial molar isentropic compression of transfer (<span><math><mrow><mi>Δ</mi><msubsup><mi>K</mi><mrow><mi>ϕ</mi><mo>,</mo><mi>S</mi></mrow><mn>0</mn></msubsup></mrow></math></span>) have been examined. Along with experiment results, computational tools were also utilized for a deeper understanding of the molecular changes. From density functional theory (DFT), the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) were calculated and utilized to obtain molecular descriptors such as ionization energy (I), electron affinity (<em>A</em>), hardness (<em>η</em>), softness (<em>S</em>), chemical potential (<em>μ</em>), and electronegativity (<em>χ</em>). Thermochemical properties, including change in enthalpy (<strong><em>Δ</em></strong><em>H</em>), and change in Gibbs free energy (<strong><em>Δ</em></strong><em>G</em>), were predicted. Molecular docking studies were used to analysis the molecular interaction of ionic liquid with I-Motif structure and structural changes.</div></div>","PeriodicalId":371,"journal":{"name":"Journal of Molecular Liquids","volume":"416 ","pages":"Article 126457"},"PeriodicalIF":5.3000,"publicationDate":"2024-11-09","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"New insight into molecular interactions of surface-active ionic liquid (SAIL) with some biomolecules: Experimental and computational approaches\",\"authors\":\"Ravinder Sharma , Pamita Awasthi , Neetika Kumari , Manu Vatsal , Arti Sharma , Ritu , Indra Bahadur , Mwadham M. Kabanda , Faruq Mohammad\",\"doi\":\"10.1016/j.molliq.2024.126457\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>Understanding the influence of ionic liquids (ILs) on the solubility of biomolecules in aqueous solutions is crucial for designing and optimizing novel biotechnological processes. However, the molecular-level mechanisms underlying this influence remain inconclusive and not fully elucidated. To contribute toward the understanding of molecular interactions between amino acids and ionic liquid in aqueous media, measurements of the densities and speeds of sound for L-serine and glycyl-L-serine in (0.00, 0.005, 0.01, 0.03, and 0.05) mol·kg<sup>−1</sup> aqueous solutions of 1-octyl-3-methylimidazolium bromide were conducted at T = (288.15, 298.15, 308.15, and 318.15) K. From experimental data various thermodynamics paramours such as apparent molar volume (<em>V<sub>ϕ</sub></em>), the partial molar volume (<span><math><msubsup><mi>V</mi><mi>ϕ</mi><mn>0</mn></msubsup></math></span>), standard partial molar volumes of transfer (<span><math><mrow><mi>Δ</mi><msubsup><mi>V</mi><mi>ϕ</mi><mn>0</mn></msubsup></mrow></math></span>) partial molar isentropic compression (<em>K<sub>ϕ,s</sub></em>) and partial molar isentropic compression of transfer (<span><math><mrow><mi>Δ</mi><msubsup><mi>K</mi><mrow><mi>ϕ</mi><mo>,</mo><mi>S</mi></mrow><mn>0</mn></msubsup></mrow></math></span>) have been examined. Along with experiment results, computational tools were also utilized for a deeper understanding of the molecular changes. From density functional theory (DFT), the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) were calculated and utilized to obtain molecular descriptors such as ionization energy (I), electron affinity (<em>A</em>), hardness (<em>η</em>), softness (<em>S</em>), chemical potential (<em>μ</em>), and electronegativity (<em>χ</em>). Thermochemical properties, including change in enthalpy (<strong><em>Δ</em></strong><em>H</em>), and change in Gibbs free energy (<strong><em>Δ</em></strong><em>G</em>), were predicted. 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New insight into molecular interactions of surface-active ionic liquid (SAIL) with some biomolecules: Experimental and computational approaches
Understanding the influence of ionic liquids (ILs) on the solubility of biomolecules in aqueous solutions is crucial for designing and optimizing novel biotechnological processes. However, the molecular-level mechanisms underlying this influence remain inconclusive and not fully elucidated. To contribute toward the understanding of molecular interactions between amino acids and ionic liquid in aqueous media, measurements of the densities and speeds of sound for L-serine and glycyl-L-serine in (0.00, 0.005, 0.01, 0.03, and 0.05) mol·kg−1 aqueous solutions of 1-octyl-3-methylimidazolium bromide were conducted at T = (288.15, 298.15, 308.15, and 318.15) K. From experimental data various thermodynamics paramours such as apparent molar volume (Vϕ), the partial molar volume (), standard partial molar volumes of transfer () partial molar isentropic compression (Kϕ,s) and partial molar isentropic compression of transfer () have been examined. Along with experiment results, computational tools were also utilized for a deeper understanding of the molecular changes. From density functional theory (DFT), the highest occupied molecular orbital (HOMO) and lowest unoccupied molecular orbital (LUMO) were calculated and utilized to obtain molecular descriptors such as ionization energy (I), electron affinity (A), hardness (η), softness (S), chemical potential (μ), and electronegativity (χ). Thermochemical properties, including change in enthalpy (ΔH), and change in Gibbs free energy (ΔG), were predicted. Molecular docking studies were used to analysis the molecular interaction of ionic liquid with I-Motif structure and structural changes.
期刊介绍:
The journal includes papers in the following areas:
– Simple organic liquids and mixtures
– Ionic liquids
– Surfactant solutions (including micelles and vesicles) and liquid interfaces
– Colloidal solutions and nanoparticles
– Thermotropic and lyotropic liquid crystals
– Ferrofluids
– Water, aqueous solutions and other hydrogen-bonded liquids
– Lubricants, polymer solutions and melts
– Molten metals and salts
– Phase transitions and critical phenomena in liquids and confined fluids
– Self assembly in complex liquids.– Biomolecules in solution
The emphasis is on the molecular (or microscopic) understanding of particular liquids or liquid systems, especially concerning structure, dynamics and intermolecular forces. The experimental techniques used may include:
– Conventional spectroscopy (mid-IR and far-IR, Raman, NMR, etc.)
– Non-linear optics and time resolved spectroscopy (psec, fsec, asec, ISRS, etc.)
– Light scattering (Rayleigh, Brillouin, PCS, etc.)
– Dielectric relaxation
– X-ray and neutron scattering and diffraction.
Experimental studies, computer simulations (MD or MC) and analytical theory will be considered for publication; papers just reporting experimental results that do not contribute to the understanding of the fundamentals of molecular and ionic liquids will not be accepted. Only papers of a non-routine nature and advancing the field will be considered for publication.