Karol Niedzielewski , Rafał P. Bartczuk , Natalia Bielczyk , Dominik Bogucki , Filip Dreger , Grzegorz Dudziuk , Łukasz Górski , Magdalena Gruziel-Słomka , Jędrzej Haman , Artur Kaczorek , Jan Kisielewski , Bartosz Krupa , Antoni Moszyński , Jędrzej M. Nowosielski , Maciej Radwan , Marcin Semeniuk , Urszula Tymoszuk , Jakub Zieliński , Franciszek Rakowski
{"title":"利用基于 pDyn 的代理模型预测波兰的 SARS-CoV-2 流行动态。","authors":"Karol Niedzielewski , Rafał P. Bartczuk , Natalia Bielczyk , Dominik Bogucki , Filip Dreger , Grzegorz Dudziuk , Łukasz Górski , Magdalena Gruziel-Słomka , Jędrzej Haman , Artur Kaczorek , Jan Kisielewski , Bartosz Krupa , Antoni Moszyński , Jędrzej M. Nowosielski , Maciej Radwan , Marcin Semeniuk , Urszula Tymoszuk , Jakub Zieliński , Franciszek Rakowski","doi":"10.1016/j.epidem.2024.100801","DOIUrl":null,"url":null,"abstract":"<div><div>We employ pDyn (derived from “pandemics dynamics”), an agent-based epidemiological model, to forecast the fourth wave of the SARS-CoV-2 epidemic, primarily driven by the Delta variant, in Polish society. The model captures spatiotemporal dynamics of the epidemic spread, predicting disease-related states based on pathogen properties and behavioral factors. We assess pDyn’s validity, encompassing pathogen variant succession, immunization level, and the proportion of vaccinated among confirmed cases. We evaluate its predictive capacity for pandemic dynamics, including wave peak timing, magnitude, and duration for confirmed cases, hospitalizations, ICU admissions, and deaths, nationally and regionally in Poland. Validation involves comparing pDyn’s estimates with real-world data (excluding data used for calibration) to evaluate whether pDyn accurately reproduced the epidemic dynamics up to the simulation time. To assess the accuracy of pDyn’s predictions, we compared simulation results with real-world data acquired after the simulation date. The findings affirm pDyn’s accuracy in forecasting and enhancing our understanding of epidemic mechanisms.</div></div>","PeriodicalId":49206,"journal":{"name":"Epidemics","volume":"49 ","pages":"Article 100801"},"PeriodicalIF":3.0000,"publicationDate":"2024-11-12","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Forecasting SARS-CoV-2 epidemic dynamic in Poland with the pDyn agent-based model\",\"authors\":\"Karol Niedzielewski , Rafał P. Bartczuk , Natalia Bielczyk , Dominik Bogucki , Filip Dreger , Grzegorz Dudziuk , Łukasz Górski , Magdalena Gruziel-Słomka , Jędrzej Haman , Artur Kaczorek , Jan Kisielewski , Bartosz Krupa , Antoni Moszyński , Jędrzej M. Nowosielski , Maciej Radwan , Marcin Semeniuk , Urszula Tymoszuk , Jakub Zieliński , Franciszek Rakowski\",\"doi\":\"10.1016/j.epidem.2024.100801\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div><div>We employ pDyn (derived from “pandemics dynamics”), an agent-based epidemiological model, to forecast the fourth wave of the SARS-CoV-2 epidemic, primarily driven by the Delta variant, in Polish society. The model captures spatiotemporal dynamics of the epidemic spread, predicting disease-related states based on pathogen properties and behavioral factors. We assess pDyn’s validity, encompassing pathogen variant succession, immunization level, and the proportion of vaccinated among confirmed cases. We evaluate its predictive capacity for pandemic dynamics, including wave peak timing, magnitude, and duration for confirmed cases, hospitalizations, ICU admissions, and deaths, nationally and regionally in Poland. Validation involves comparing pDyn’s estimates with real-world data (excluding data used for calibration) to evaluate whether pDyn accurately reproduced the epidemic dynamics up to the simulation time. To assess the accuracy of pDyn’s predictions, we compared simulation results with real-world data acquired after the simulation date. The findings affirm pDyn’s accuracy in forecasting and enhancing our understanding of epidemic mechanisms.</div></div>\",\"PeriodicalId\":49206,\"journal\":{\"name\":\"Epidemics\",\"volume\":\"49 \",\"pages\":\"Article 100801\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2024-11-12\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Epidemics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://www.sciencedirect.com/science/article/pii/S1755436524000628\",\"RegionNum\":3,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"INFECTIOUS DISEASES\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Epidemics","FirstCategoryId":"3","ListUrlMain":"https://www.sciencedirect.com/science/article/pii/S1755436524000628","RegionNum":3,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"INFECTIOUS DISEASES","Score":null,"Total":0}
Forecasting SARS-CoV-2 epidemic dynamic in Poland with the pDyn agent-based model
We employ pDyn (derived from “pandemics dynamics”), an agent-based epidemiological model, to forecast the fourth wave of the SARS-CoV-2 epidemic, primarily driven by the Delta variant, in Polish society. The model captures spatiotemporal dynamics of the epidemic spread, predicting disease-related states based on pathogen properties and behavioral factors. We assess pDyn’s validity, encompassing pathogen variant succession, immunization level, and the proportion of vaccinated among confirmed cases. We evaluate its predictive capacity for pandemic dynamics, including wave peak timing, magnitude, and duration for confirmed cases, hospitalizations, ICU admissions, and deaths, nationally and regionally in Poland. Validation involves comparing pDyn’s estimates with real-world data (excluding data used for calibration) to evaluate whether pDyn accurately reproduced the epidemic dynamics up to the simulation time. To assess the accuracy of pDyn’s predictions, we compared simulation results with real-world data acquired after the simulation date. The findings affirm pDyn’s accuracy in forecasting and enhancing our understanding of epidemic mechanisms.
期刊介绍:
Epidemics publishes papers on infectious disease dynamics in the broadest sense. Its scope covers both within-host dynamics of infectious agents and dynamics at the population level, particularly the interaction between the two. Areas of emphasis include: spread, transmission, persistence, implications and population dynamics of infectious diseases; population and public health as well as policy aspects of control and prevention; dynamics at the individual level; interaction with the environment, ecology and evolution of infectious diseases, as well as population genetics of infectious agents.