用于微调儿科患者胸部 X 射线骨抑制网络的高效标记。

IF 3.2 2区 医学 Q1 RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING
Medical physics Pub Date : 2024-11-15 DOI:10.1002/mp.17516
Weijie Xie, Mengkun Gan, Xiaocong Tan, Mujiao Li, Wei Yang, Wenhui Wang
{"title":"用于微调儿科患者胸部 X 射线骨抑制网络的高效标记。","authors":"Weijie Xie,&nbsp;Mengkun Gan,&nbsp;Xiaocong Tan,&nbsp;Mujiao Li,&nbsp;Wei Yang,&nbsp;Wenhui Wang","doi":"10.1002/mp.17516","DOIUrl":null,"url":null,"abstract":"<div>\n \n \n <section>\n \n <h3> Background</h3>\n \n <p>Pneumonia, a major infectious cause of morbidity and mortality among children worldwide, is typically diagnosed using low-dose pediatric chest X-ray [CXR (chest radiography)]. In pediatric CXR images, bone occlusion leads to a risk of missed diagnosis. Deep learning–based bone-suppression networks relying on training data have enabled considerable progress to be achieved in bone suppression in adult CXR images; however, these networks have poor generalizability to pediatric CXR images because of the lack of labeled pediatric CXR images (i.e., bone images vs. soft-tissue images). Dual-energy subtraction imaging approaches are capable of producing labeled adult CXR images; however, their application is limited because they require specialized equipment, and they are infrequently employed in pediatric settings. Traditional image processing–based models can be used to label pediatric CXR images, but they are semiautomatic and have suboptimal performance.</p>\n </section>\n \n <section>\n \n <h3> Purpose</h3>\n \n <p>We developed an efficient labeling approach for fine-tuning pediatric CXR bone-suppression networks capable of automatically suppressing bone structures in CXR images for pediatric patients without the need for specialized equipment and technologist training.</p>\n </section>\n \n <section>\n \n <h3> Methods</h3>\n \n <p>Three steps were employed to label pediatric CXR images and fine-tune pediatric bone-suppression networks: distance transform–based bone-edge detection, traditional image processing–based bone suppression, and fully automated pediatric bone suppression. In distance transform–based bone-edge detection, bone edges were automatically detected by predicting bone-edge distance-transform images, which were then used as inputs in traditional image processing. In this processing, pediatric CXR images were labeled by obtaining bone images through a series of traditional image processing techniques. Finally, the pediatric bone-suppression network was fine-tuned using the labeled pediatric CXR images. This network was initially pretrained on a public adult dataset comprising 240 adult CXR images (A240) and then fine-tuned and validated on 40 pediatric CXR images (P260_40labeled) from our customized dataset (named P260) through five-fold cross-validation; finally, the network was tested on 220 pediatric CXR images (P260_220unlabeled dataset).</p>\n </section>\n \n <section>\n \n <h3> Results</h3>\n \n <p>The distance transform–based bone-edge detection network achieved a mean boundary distance of 1.029. Moreover, the traditional image processing–based bone-suppression model obtained bone images exhibiting a relative Weber contrast of 93.0%. Finally, the fully automated pediatric bone-suppression network achieved a relative mean absolute error of 3.38%, a peak signal-to-noise ratio of 35.5 dB, a structural similarity index measure of 98.1%, and a bone-suppression ratio of 90.1% on P260_40labeled.</p>\n </section>\n \n <section>\n \n <h3> Conclusions</h3>\n \n <p>The proposed fully automated pediatric bone-suppression network, together with the proposed distance transform–based bone-edge detection network, can automatically acquire bone and soft-tissue images solely from CXR images for pediatric patients and has the potential to help diagnose pneumonia in children.</p>\n </section>\n </div>","PeriodicalId":18384,"journal":{"name":"Medical physics","volume":"52 2","pages":"978-992"},"PeriodicalIF":3.2000,"publicationDate":"2024-11-15","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mp.17516","citationCount":"0","resultStr":"{\"title\":\"Efficient labeling for fine-tuning chest X-ray bone-suppression networks for pediatric patients\",\"authors\":\"Weijie Xie,&nbsp;Mengkun Gan,&nbsp;Xiaocong Tan,&nbsp;Mujiao Li,&nbsp;Wei Yang,&nbsp;Wenhui Wang\",\"doi\":\"10.1002/mp.17516\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n \\n <section>\\n \\n <h3> Background</h3>\\n \\n <p>Pneumonia, a major infectious cause of morbidity and mortality among children worldwide, is typically diagnosed using low-dose pediatric chest X-ray [CXR (chest radiography)]. In pediatric CXR images, bone occlusion leads to a risk of missed diagnosis. Deep learning–based bone-suppression networks relying on training data have enabled considerable progress to be achieved in bone suppression in adult CXR images; however, these networks have poor generalizability to pediatric CXR images because of the lack of labeled pediatric CXR images (i.e., bone images vs. soft-tissue images). Dual-energy subtraction imaging approaches are capable of producing labeled adult CXR images; however, their application is limited because they require specialized equipment, and they are infrequently employed in pediatric settings. Traditional image processing–based models can be used to label pediatric CXR images, but they are semiautomatic and have suboptimal performance.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Purpose</h3>\\n \\n <p>We developed an efficient labeling approach for fine-tuning pediatric CXR bone-suppression networks capable of automatically suppressing bone structures in CXR images for pediatric patients without the need for specialized equipment and technologist training.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Methods</h3>\\n \\n <p>Three steps were employed to label pediatric CXR images and fine-tune pediatric bone-suppression networks: distance transform–based bone-edge detection, traditional image processing–based bone suppression, and fully automated pediatric bone suppression. In distance transform–based bone-edge detection, bone edges were automatically detected by predicting bone-edge distance-transform images, which were then used as inputs in traditional image processing. In this processing, pediatric CXR images were labeled by obtaining bone images through a series of traditional image processing techniques. Finally, the pediatric bone-suppression network was fine-tuned using the labeled pediatric CXR images. This network was initially pretrained on a public adult dataset comprising 240 adult CXR images (A240) and then fine-tuned and validated on 40 pediatric CXR images (P260_40labeled) from our customized dataset (named P260) through five-fold cross-validation; finally, the network was tested on 220 pediatric CXR images (P260_220unlabeled dataset).</p>\\n </section>\\n \\n <section>\\n \\n <h3> Results</h3>\\n \\n <p>The distance transform–based bone-edge detection network achieved a mean boundary distance of 1.029. Moreover, the traditional image processing–based bone-suppression model obtained bone images exhibiting a relative Weber contrast of 93.0%. Finally, the fully automated pediatric bone-suppression network achieved a relative mean absolute error of 3.38%, a peak signal-to-noise ratio of 35.5 dB, a structural similarity index measure of 98.1%, and a bone-suppression ratio of 90.1% on P260_40labeled.</p>\\n </section>\\n \\n <section>\\n \\n <h3> Conclusions</h3>\\n \\n <p>The proposed fully automated pediatric bone-suppression network, together with the proposed distance transform–based bone-edge detection network, can automatically acquire bone and soft-tissue images solely from CXR images for pediatric patients and has the potential to help diagnose pneumonia in children.</p>\\n </section>\\n </div>\",\"PeriodicalId\":18384,\"journal\":{\"name\":\"Medical physics\",\"volume\":\"52 2\",\"pages\":\"978-992\"},\"PeriodicalIF\":3.2000,\"publicationDate\":\"2024-11-15\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://onlinelibrary.wiley.com/doi/epdf/10.1002/mp.17516\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Medical physics\",\"FirstCategoryId\":\"3\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/mp.17516\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Medical physics","FirstCategoryId":"3","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/mp.17516","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"RADIOLOGY, NUCLEAR MEDICINE & MEDICAL IMAGING","Score":null,"Total":0}
引用次数: 0

摘要

背景:肺炎是全球儿童发病和死亡的主要传染病因,通常使用低剂量小儿胸部 X 光片[CXR(胸部放射摄影)]进行诊断。在小儿 CXR 图像中,骨闭塞会导致漏诊风险。基于深度学习的骨抑制网络依靠训练数据,在成人 CXR 图像的骨抑制方面取得了长足进步;然而,由于缺乏标注的儿科 CXR 图像(即骨图像与软组织图像),这些网络对儿科 CXR 图像的普适性较差。双能量减影成像方法能够生成标注的成人 CXR 图像,但其应用受到限制,因为它们需要专门的设备,而且很少在儿科环境中使用。目的:我们开发了一种高效的标记方法,用于微调儿科 CXR 骨抑制网络,能够自动抑制儿科患者 CXR 图像中的骨结构,而无需专业设备和技术人员培训:采用三个步骤标记儿科 CXR 图像并微调儿科骨抑制网络:基于距离变换的骨边缘检测、基于传统图像处理的骨抑制和全自动儿科骨抑制。在基于距离变换的骨边缘检测中,通过预测骨边缘距离变换图像自动检测骨边缘,然后将其作为传统图像处理的输入。在这一处理过程中,通过一系列传统图像处理技术获取骨图像,对小儿 CXR 图像进行标记。最后,利用标注的小儿 CXR 图像对小儿骨抑制网络进行微调。该网络首先在由 240 张成人 CXR 图像组成的公共成人数据集(A240)上进行预训练,然后通过五倍交叉验证,在我们定制的数据集(命名为 P260)中的 40 张儿科 CXR 图像(P260_40 标签)上进行微调和验证;最后,在 220 张儿科 CXR 图像(P260_220 无标签数据集)上对该网络进行测试:结果:基于距离变换的骨边缘检测网络的平均边界距离达到了 1.029。此外,基于传统图像处理的骨抑制模型获得的骨图像的相对韦伯对比度为 93.0%。最后,全自动儿科骨抑制网络在 P260_40 标记上的相对平均绝对误差为 3.38%,峰值信噪比为 35.5 dB,结构相似性指数为 98.1%,骨抑制率为 90.1%:结论:所提出的全自动儿科骨抑制网络和基于距离变换的骨边缘检测网络可以仅从 CXR 图像中自动获取儿科患者的骨和软组织图像,有望帮助诊断儿童肺炎。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

Efficient labeling for fine-tuning chest X-ray bone-suppression networks for pediatric patients

Efficient labeling for fine-tuning chest X-ray bone-suppression networks for pediatric patients

Background

Pneumonia, a major infectious cause of morbidity and mortality among children worldwide, is typically diagnosed using low-dose pediatric chest X-ray [CXR (chest radiography)]. In pediatric CXR images, bone occlusion leads to a risk of missed diagnosis. Deep learning–based bone-suppression networks relying on training data have enabled considerable progress to be achieved in bone suppression in adult CXR images; however, these networks have poor generalizability to pediatric CXR images because of the lack of labeled pediatric CXR images (i.e., bone images vs. soft-tissue images). Dual-energy subtraction imaging approaches are capable of producing labeled adult CXR images; however, their application is limited because they require specialized equipment, and they are infrequently employed in pediatric settings. Traditional image processing–based models can be used to label pediatric CXR images, but they are semiautomatic and have suboptimal performance.

Purpose

We developed an efficient labeling approach for fine-tuning pediatric CXR bone-suppression networks capable of automatically suppressing bone structures in CXR images for pediatric patients without the need for specialized equipment and technologist training.

Methods

Three steps were employed to label pediatric CXR images and fine-tune pediatric bone-suppression networks: distance transform–based bone-edge detection, traditional image processing–based bone suppression, and fully automated pediatric bone suppression. In distance transform–based bone-edge detection, bone edges were automatically detected by predicting bone-edge distance-transform images, which were then used as inputs in traditional image processing. In this processing, pediatric CXR images were labeled by obtaining bone images through a series of traditional image processing techniques. Finally, the pediatric bone-suppression network was fine-tuned using the labeled pediatric CXR images. This network was initially pretrained on a public adult dataset comprising 240 adult CXR images (A240) and then fine-tuned and validated on 40 pediatric CXR images (P260_40labeled) from our customized dataset (named P260) through five-fold cross-validation; finally, the network was tested on 220 pediatric CXR images (P260_220unlabeled dataset).

Results

The distance transform–based bone-edge detection network achieved a mean boundary distance of 1.029. Moreover, the traditional image processing–based bone-suppression model obtained bone images exhibiting a relative Weber contrast of 93.0%. Finally, the fully automated pediatric bone-suppression network achieved a relative mean absolute error of 3.38%, a peak signal-to-noise ratio of 35.5 dB, a structural similarity index measure of 98.1%, and a bone-suppression ratio of 90.1% on P260_40labeled.

Conclusions

The proposed fully automated pediatric bone-suppression network, together with the proposed distance transform–based bone-edge detection network, can automatically acquire bone and soft-tissue images solely from CXR images for pediatric patients and has the potential to help diagnose pneumonia in children.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
Medical physics
Medical physics 医学-核医学
CiteScore
6.80
自引率
15.80%
发文量
660
审稿时长
1.7 months
期刊介绍: Medical Physics publishes original, high impact physics, imaging science, and engineering research that advances patient diagnosis and therapy through contributions in 1) Basic science developments with high potential for clinical translation 2) Clinical applications of cutting edge engineering and physics innovations 3) Broadly applicable and innovative clinical physics developments Medical Physics is a journal of global scope and reach. By publishing in Medical Physics your research will reach an international, multidisciplinary audience including practicing medical physicists as well as physics- and engineering based translational scientists. We work closely with authors of promising articles to improve their quality.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信