计算机辅助发现具有抗染色体潜能的 Abrus precatorius 化合物。

IF 2.3 Q3 ENGINEERING, BIOMEDICAL
Biomedical Engineering and Computational Biology Pub Date : 2024-11-10 eCollection Date: 2024-01-01 DOI:10.1177/11795972241294112
Ryman Shoko, Allen Mazadza
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引用次数: 0

摘要

血吸虫病每年造成 20 多万人死亡,自 20 世纪 70 年代以来一直由吡喹酮控制。由于依赖单一药物防治血吸虫病,而且有报告称实验室发现了抗药性,因此科学界迫切需要开发新的化学疗法来补充吡喹酮。药用植物是具有杀血吸虫活性的化合物的潜在宝库。在目前的研究中,我们对 Abrus precatorius 的化合物进行了计算机辅助筛选,以发现具有抑制曼氏血吸虫嘌呤核苷磷酸酶(SmPNP)潜力的化合物。因此,将从莲花天然化合物数据库中检索到的 99 个化合物与 SmPNP 的活性位点对接。对排名靠前的化合物进行了利宾斯基药物相似性和毒性风险预测。确定了三个先导化合物:abrusogenin、cirsimaritin 和 hispidulin,它们具有较高的结合亲和力、与 SmPNP 活性位点残基的良好相互作用以及良好的毒性风险预测结果。分子动力学(MD)模拟用于评估这些先导化合物与 SmPNP 相互作用的稳定性。对分子动力学轨迹的综合分析证实,先导化合物与 SmPNP 的活性位点残基结合并发生了稳定的相互作用。我们的结论是,Abrusogenin、cirsimaritin 和 hispidulin 可作为基于植物天然产物开发新型抗血吸虫药物的热门化合物。不过,要进一步评估这些化合物作为血吸虫病治疗药物的潜力,还需要进行实验研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Computer-Aided Discovery of Abrus precatorius Compounds With Anti-Schistosomal Potential.

Schistosomiasis, which causes over 200 000 deaths annually, has since the 1970s been controlled by praziquintel. The reliance on a single drug to combat schistosomiasis, and reports of laboratory resistance to the drug, has created an urgent need in the scientific community to develop new chemotherapies to complement or supplement praziquantel. Medicinal plants are a potential reservoir of compounds with schistosomicidal activity. In the current study, we carried out computer-aided screening of Abrus precatorius compounds to discover compounds with potential to inhibit Schistosoma mansoni purine nucleoside phosphorylase (SmPNP). Thus, 99 compounds retrieved from Lotus Natural Compounds Database were docked into the active site of SmPNP. The top-ranked compounds were subjected to Lipinski's druglikeness and toxicity risk predictions. Three lead compounds, abrusogenin, cirsimaritin and hispidulin, were identified as having high binding affinities, favourable interactions with SmPNP active site residues and good toxicity risk prediction results. Molecular dynamics (MD) simulations were used to assess the stability of the interactions of these lead compounds with SmPNP. Collectively, analyses of the MD trajectories confirms that the lead compounds bound and interacted stably with active site residues of SmPNP. We conclude that abrusogenin, cirsimaritin and hispidulin could serve as hit compounds for the development of new antischistosomal drugs, based on plant-derived natural products. However, experimental studies are required to further evaluate the potentials of these compounds as possible therapeutics against schistosomiasis.

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