{"title":"推断两种最古老松鼠化石的运动生态:操作、性状、体型和机器学习方法的影响。","authors":"Jan Wölfer, Lionel Hautier","doi":"10.1098/rspb.2024.0743","DOIUrl":null,"url":null,"abstract":"<p><p>Correlations between morphology and lifestyle of extant taxa are useful for predicting lifestyles of extinct relatives. Here, we infer the locomotor behaviour of <i>Palaeosciurus goti</i> from the middle Oligocene and <i>Palaeosciurus feignouxi</i> from the lower Miocene of France using their femoral morphology and different machine learning methods. We used two ways to operationalize morphology, in the form of a geometric morphometric shape dataset and a multivariate dataset of 11 femoral traits. The predictive models were built and tested using more than half (180) of the extant species of squirrel relatives. Both traditional models such as linear discriminant analysis and more sophisticated models like neural networks had the greatest predictive power. However, the predictive power also depended on the operationalization and the femoral traits used to build the model. We also found that predictive power tended to improve with increasing body size. Contrary to previous suggestions, the older species, <i>P. goti</i>, was most likely arboreal, whereas <i>P. feignouxi</i> was more likely terrestrial. This provides further evidence that arboreality was already the most common locomotor ecology among the earliest squirrels, while a predominantly terrestrial locomotor behaviour evolved shortly afterwards, before the vast establishment of grasslands in Europe.</p>","PeriodicalId":20589,"journal":{"name":"Proceedings of the Royal Society B: Biological Sciences","volume":"291 2034","pages":"20240743"},"PeriodicalIF":3.8000,"publicationDate":"2024-11-01","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11557241/pdf/","citationCount":"0","resultStr":"{\"title\":\"Inferring the locomotor ecology of two of the oldest fossil squirrels: influence of operationalization, trait, body size and machine learning method.\",\"authors\":\"Jan Wölfer, Lionel Hautier\",\"doi\":\"10.1098/rspb.2024.0743\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Correlations between morphology and lifestyle of extant taxa are useful for predicting lifestyles of extinct relatives. Here, we infer the locomotor behaviour of <i>Palaeosciurus goti</i> from the middle Oligocene and <i>Palaeosciurus feignouxi</i> from the lower Miocene of France using their femoral morphology and different machine learning methods. We used two ways to operationalize morphology, in the form of a geometric morphometric shape dataset and a multivariate dataset of 11 femoral traits. The predictive models were built and tested using more than half (180) of the extant species of squirrel relatives. Both traditional models such as linear discriminant analysis and more sophisticated models like neural networks had the greatest predictive power. However, the predictive power also depended on the operationalization and the femoral traits used to build the model. We also found that predictive power tended to improve with increasing body size. Contrary to previous suggestions, the older species, <i>P. goti</i>, was most likely arboreal, whereas <i>P. feignouxi</i> was more likely terrestrial. This provides further evidence that arboreality was already the most common locomotor ecology among the earliest squirrels, while a predominantly terrestrial locomotor behaviour evolved shortly afterwards, before the vast establishment of grasslands in Europe.</p>\",\"PeriodicalId\":20589,\"journal\":{\"name\":\"Proceedings of the Royal Society B: Biological Sciences\",\"volume\":\"291 2034\",\"pages\":\"20240743\"},\"PeriodicalIF\":3.8000,\"publicationDate\":\"2024-11-01\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11557241/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Proceedings of the Royal Society B: Biological Sciences\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1098/rspb.2024.0743\",\"RegionNum\":1,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/11/13 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"BIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Proceedings of the Royal Society B: Biological Sciences","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1098/rspb.2024.0743","RegionNum":1,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/11/13 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"BIOLOGY","Score":null,"Total":0}
引用次数: 0
摘要
现生类群的形态与生活方式之间的相关性有助于预测已灭绝类群的生活方式。在这里,我们使用股骨形态学和不同的机器学习方法推断了法国中新世中期的古鳞蜥Goti和中新世晚期的古鳞蜥F feignouxi的运动行为。我们使用了两种方法来操作形态学,一种是几何形态形状数据集,另一种是包含 11 个股骨特征的多元数据集。预测模型的建立和测试使用了现存松鼠近缘物种中的一半以上(180 种)。线性判别分析等传统模型和神经网络等更复杂的模型都具有最强的预测能力。不过,预测能力也取决于建立模型时使用的操作方法和股骨特征。我们还发现,预测能力往往会随着体型的增加而提高。与之前的观点相反,较老的物种 P. goti 最有可能是树栖的,而 P. feignouxi 则更有可能是陆栖的。这进一步证明,树栖已经是最早的松鼠中最常见的运动生态,而在欧洲大面积建立草原之前,以陆栖为主的运动行为是在不久之后进化而来的。
Inferring the locomotor ecology of two of the oldest fossil squirrels: influence of operationalization, trait, body size and machine learning method.
Correlations between morphology and lifestyle of extant taxa are useful for predicting lifestyles of extinct relatives. Here, we infer the locomotor behaviour of Palaeosciurus goti from the middle Oligocene and Palaeosciurus feignouxi from the lower Miocene of France using their femoral morphology and different machine learning methods. We used two ways to operationalize morphology, in the form of a geometric morphometric shape dataset and a multivariate dataset of 11 femoral traits. The predictive models were built and tested using more than half (180) of the extant species of squirrel relatives. Both traditional models such as linear discriminant analysis and more sophisticated models like neural networks had the greatest predictive power. However, the predictive power also depended on the operationalization and the femoral traits used to build the model. We also found that predictive power tended to improve with increasing body size. Contrary to previous suggestions, the older species, P. goti, was most likely arboreal, whereas P. feignouxi was more likely terrestrial. This provides further evidence that arboreality was already the most common locomotor ecology among the earliest squirrels, while a predominantly terrestrial locomotor behaviour evolved shortly afterwards, before the vast establishment of grasslands in Europe.
期刊介绍:
Proceedings B is the Royal Society’s flagship biological research journal, accepting original articles and reviews of outstanding scientific importance and broad general interest. The main criteria for acceptance are that a study is novel, and has general significance to biologists. Articles published cover a wide range of areas within the biological sciences, many have relevance to organisms and the environments in which they live. The scope includes, but is not limited to, ecology, evolution, behavior, health and disease epidemiology, neuroscience and cognition, behavioral genetics, development, biomechanics, paleontology, comparative biology, molecular ecology and evolution, and global change biology.