遗传性视网膜疾病基因检测率的种族差异

IF 7.8 1区 医学 Q1 OPHTHALMOLOGY
Rebhi O. Abuzaitoun, Kari H. Branham, Gabrielle D. Lacy, Robert B. Hufnagel, Meenakshi M. Kumar, Juha W. Koskenvuo, Sari Tuupanen, Todd Durham, Peter Y. Zhao, Maria Fernanda Abalem, Chris A. Andrews, Dana Schlegel, Naheed W. Khan, Abigail T. Fahim, John R. Heckenlively, David C. Musch, K. Thiran Jayasundera
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At UM, inclusion criteria included having a clinical IRD diagnosis, wide-panel genetic testing, and both parents and the patient self-identifying as the same race (Black or non-Hispanic White). Logistic regression analysis was used; the dependent variable was genetic test result (positive or negative/inconclusive) and the independent variables were race, age, sex, phenotype, and number of genes tested. In the BG database, patients with wide-panel testing and self-reported race were included; detection rate comparison analysis based on race was performed using χ<jats:sup>2</jats:sup> test of independence. These data were analyzed from October 30, 2013, through October 26, 2022.Main Outcome and MeasureGenetic test result was considered positive if pathogenic/likely pathogenic variants were detected.ResultsA total of 572 patients were included in UM, 295 were males (51.6%). Mean age was 45 years. There were 54 Black patients (9.4%) and 518 White patients (90.6%). 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引用次数: 0

摘要

重要意义据我们所知,以前从未研究过种族与通过遗传性视网膜疾病(IRD)宽谱基因检测发现致病变体之间的关系。目的研究黑人和非西班牙裔白人 IRD 患者宽谱基因检测的基因检出率。在密歇根大学,纳入标准包括临床 IRD 诊断、宽泛的基因检测、父母双方和患者自我认同为同一种族(黑人或非西班牙裔白人)。采用逻辑回归分析;因变量为基因检测结果(阳性或阴性/不确定),自变量为种族、年龄、性别、表型和检测基因的数量。在 BG 数据库中,纳入了接受广谱检测且自报种族的患者;使用 χ2 独立性检验对基于种族的检出率进行比较分析。这些数据的分析时间为 2013 年 10 月 30 日至 2022 年 10 月 26 日。主要结果和测量如果检测到致病/可能致病变异,则认为基因检测结果为阳性。结果 UM 共纳入 572 名患者,其中 295 名男性(51.6%)。平均年龄为 45 岁。其中黑人患者 54 人(9.4%),白人患者 518 人(90.6%)。黑人种族(几率比 [OR],0.25;95% CI,0.14-0.46;P &amp;lt; .001)和年龄(每 10 年的几率比,0.84;95% CI,0.76-0.92;P &amp;lt; .001)与检测结果呈阳性的几率降低独立相关。在 BG 数据库中,320 位黑人患者中有 142 位(44.4%)检测结果呈阳性/可能呈阳性,这一比例低于白人患者(2931 位患者中有 1691 位[57.7%])(χ2 = 18.65; df = 1; P &amp;lt; .001)。这支持了一种担忧,即目前 IRD 治疗药物的开发高度依赖于确定遗传病因的能力。没有已知基因诊断的患者可能在预后、遗传咨询、生育决策以及潜在治疗方案(包括临床试验)的资格等方面处于不利地位。随着未来治疗方法的出现,这些研究结果表明有必要对多数群体和少数群体的基因检测率进行研究。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Racial Disparities in Genetic Detection Rates for Inherited Retinal Diseases
ImportanceThe association of race and detection of pathogenic variants using wide-panel genetic testing for inherited retinal diseases (IRD), to our knowledge, has not been studied previously.ObjectiveTo investigate the genetic detection rates of wide-panel testing in Black and non-Hispanic White patients with IRDs.Design, Setting, ParticipantsThis 2-group comparison used retrospective patient data that were collected at the University of Michigan (UM) and Blueprint Genetics (BG). At UM, inclusion criteria included having a clinical IRD diagnosis, wide-panel genetic testing, and both parents and the patient self-identifying as the same race (Black or non-Hispanic White). Logistic regression analysis was used; the dependent variable was genetic test result (positive or negative/inconclusive) and the independent variables were race, age, sex, phenotype, and number of genes tested. In the BG database, patients with wide-panel testing and self-reported race were included; detection rate comparison analysis based on race was performed using χ2 test of independence. These data were analyzed from October 30, 2013, through October 26, 2022.Main Outcome and MeasureGenetic test result was considered positive if pathogenic/likely pathogenic variants were detected.ResultsA total of 572 patients were included in UM, 295 were males (51.6%). Mean age was 45 years. There were 54 Black patients (9.4%) and 518 White patients (90.6%). Black race (odds ratio [OR], 0.25; 95% CI, 0.14-0.46; P &amp;lt; .001) and age (OR per 10 years, 0.84; 95% CI, 0.76-0.92; P &amp;lt; .001) were independently associated with decreased odds of a positive test. In the BG database, 142 of 320 of Black patients (44.4%) had a positive/likely positive test result, a proportion lower than White patients (1691 of 2931 [57.7%]) (χ2 = 18.65; df = 1; P &amp;lt; .001).Conclusions and RelevanceResults from this study highlight a lower genetic detection rate for Black patients than for White patients with IRDs. This supports a concern that the current development of IRD therapeutics is highly dependent on the ability to identify the genetic cause of disease. Patients with no known genetic diagnosis may be disadvantaged in terms of prognostication, inheritance counseling, reproductive decision-making, and eligibility for potential therapeutic options, including clinical trials. As future treatments become available, these findings suggest the need to examine the genetic detection rates across majority and minority subgroups alike.
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来源期刊
JAMA ophthalmology
JAMA ophthalmology OPHTHALMOLOGY-
CiteScore
13.20
自引率
3.70%
发文量
340
期刊介绍: JAMA Ophthalmology, with a rich history of continuous publication since 1869, stands as a distinguished international, peer-reviewed journal dedicated to ophthalmology and visual science. In 2019, the journal proudly commemorated 150 years of uninterrupted service to the field. As a member of the esteemed JAMA Network, a consortium renowned for its peer-reviewed general medical and specialty publications, JAMA Ophthalmology upholds the highest standards of excellence in disseminating cutting-edge research and insights. Join us in celebrating our legacy and advancing the frontiers of ophthalmology and visual science.
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