Bidens aurea叶绿体的完整基因组序列。

Pub Date : 2024-11-04 eCollection Date: 2024-01-01 DOI:10.1080/23802359.2024.2420846

Hongyu Mao, Ziyi Wang, Yuanyu Shan, Xin Cheng, Jie Yu

{"title":"Bidens aurea叶绿体的完整基因组序列。","authors":"Hongyu Mao, Ziyi Wang, Yuanyu Shan, Xin Cheng, Jie Yu","doi":"10.1080/23802359.2024.2420846","DOIUrl":null,"url":null,"abstract":"Bidens aurea (Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the B. aurea chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 Bidens taxa were divided into five major clades, and B. aurea was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.","PeriodicalId":0,"journal":{"name":"","volume":null,"pages":null},"PeriodicalIF":0.0,"publicationDate":"2024-11-04","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11536667/pdf/","citationCount":"0","resultStr":"{\"title\":\"The complete genome sequence of the chloroplast of Bidens aurea.\",\"authors\":\"Hongyu Mao, Ziyi Wang, Yuanyu Shan, Xin Cheng, Jie Yu\",\"doi\":\"10.1080/23802359.2024.2420846\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"Bidens aurea (Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the B. aurea chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 Bidens taxa were divided into five major clades, and B. aurea was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.\",\"PeriodicalId\":0,\"journal\":{\"name\":\"\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":0.0,\"publicationDate\":\"2024-11-04\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11536667/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1080/23802359.2024.2420846\",\"RegionNum\":0,\"RegionCategory\":null,\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"\",\"JCRName\":\"\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1080/23802359.2024.2420846","RegionNum":0,"RegionCategory":null,"ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"","JCRName":"","Score":null,"Total":0}

引用次数: 0

摘要

Bidens aurea（菊科）原产于美洲热带地区，现广泛分布于亚洲和美洲。我们研究了 B. aurea 的叶绿体基因组，并进行了系统发育分析。叶绿体基因组呈环状，由一个 83,909 碱基对（bp）的大单拷贝（LSC）、一个 18,407 bp 的小单拷贝（SSC）和两个各 24,729 bp 的倒位重复区（IR）组成。系统发育分析表明，19 个 Bidens 类群分为 5 个主要支系，其中 B. aurea 与两个物种的亲缘关系最为密切。我们的研究结果提供了高质量的 B. aurea 叶绿体基因组，有助于 DNA 条形码的开发和进化史的重建。

本文章由计算机程序翻译，如有差异，请以英文原文为准。

查看原文

The complete genome sequence of the chloroplast of Bidens aurea.

Bidens aurea (Asteraceae), a native of tropical America is now widespread in Asia and the Americas. We explored the B. aurea chloroplast genome and conducted a phylogenetic analysis. The chloroplast genome was circular, consisting of a large single copy (LSC) of 83,909 base pairs (bp), a small single copy (SSC) of 18,407 bp, and two inverted repeat regions (IR) of 24,729 bp each. Phylogenetic analysis showed that the 19 Bidens taxa were divided into five major clades, and B. aurea was most closely related to two species. Our findings offer a high-quality B. aurea chloroplast genome, aiding DNA barcode development and evolutionary history reconstruction.

求助全文

通过发布文献求助，成功后即可免费获取论文全文。去求助