ATP 触发的铁(CN)2CO 同源物从母核酶 HypCD 转移到 Apo-[NiFe]-Hydrogenase 的活性位点。

IF 14.4 1区 化学 Q1 CHEMISTRY, MULTIDISCIPLINARY
Journal of the American Chemical Society Pub Date : 2024-11-13 Epub Date: 2024-11-03 DOI:10.1021/jacs.4c09791
Anna Kwiatkowski, Giorgio Caserta, Anne-Christine Schulz, Stefan Frielingsdorf, Vladimir Pelmenschikov, Kilian Weisser, Adam Belsom, Juri Rappsilber, Ilya Sergueev, Christian Limberg, Maria-Andrea Mroginski, Ingo Zebger, Oliver Lenz
{"title":"ATP 触发的铁(CN)2CO 同源物从母核酶 HypCD 转移到 Apo-[NiFe]-Hydrogenase 的活性位点。","authors":"Anna Kwiatkowski, Giorgio Caserta, Anne-Christine Schulz, Stefan Frielingsdorf, Vladimir Pelmenschikov, Kilian Weisser, Adam Belsom, Juri Rappsilber, Ilya Sergueev, Christian Limberg, Maria-Andrea Mroginski, Ingo Zebger, Oliver Lenz","doi":"10.1021/jacs.4c09791","DOIUrl":null,"url":null,"abstract":"<p><p>[NiFe]-hydrogenases catalyze the reversible activation of H<sub>2</sub> using a unique NiFe(CN)<sub>2</sub>CO metal site, which is assembled by a sophisticated multiprotein machinery. The [4Fe-4S] cluster-containing HypCD complex, which possesses an ATPase activity with a hitherto unknown function, serves as the hub for the assembly of the Fe(CN)<sub>2</sub>CO subfragment. HypCD is also thought to be responsible for the subsequent transfer of the iron fragment to the apo-form of the catalytic hydrogenase subunit, but the underlying mechanism has remained unexplored. Here, we performed a thorough spectroscopic characterization of different HypCD preparations using infrared, Mössbauer, and NRVS spectroscopy, revealing molecular details of the coordination of the Fe(CN)<sub>2</sub>CO fragment. Moreover, biochemical assays in combination with spectroscopy, AlphaFold structure predictions, protein-ligand docking calculations, and crosslinking MS deciphered unexpected mechanistic aspects of the ATP requirement of HypCD, which we found to actually trigger the transfer of the Fe(CN)<sub>2</sub>CO fragment to the apo-hydrogenase.</p>","PeriodicalId":49,"journal":{"name":"Journal of the American Chemical Society","volume":" ","pages":"30976-30989"},"PeriodicalIF":14.4000,"publicationDate":"2024-11-13","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11565642/pdf/","citationCount":"0","resultStr":"{\"title\":\"ATP-Triggered Fe(CN)<sub>2</sub>CO Synthon Transfer from the Maturase HypCD to the Active Site of Apo-[NiFe]-Hydrogenase.\",\"authors\":\"Anna Kwiatkowski, Giorgio Caserta, Anne-Christine Schulz, Stefan Frielingsdorf, Vladimir Pelmenschikov, Kilian Weisser, Adam Belsom, Juri Rappsilber, Ilya Sergueev, Christian Limberg, Maria-Andrea Mroginski, Ingo Zebger, Oliver Lenz\",\"doi\":\"10.1021/jacs.4c09791\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>[NiFe]-hydrogenases catalyze the reversible activation of H<sub>2</sub> using a unique NiFe(CN)<sub>2</sub>CO metal site, which is assembled by a sophisticated multiprotein machinery. The [4Fe-4S] cluster-containing HypCD complex, which possesses an ATPase activity with a hitherto unknown function, serves as the hub for the assembly of the Fe(CN)<sub>2</sub>CO subfragment. HypCD is also thought to be responsible for the subsequent transfer of the iron fragment to the apo-form of the catalytic hydrogenase subunit, but the underlying mechanism has remained unexplored. Here, we performed a thorough spectroscopic characterization of different HypCD preparations using infrared, Mössbauer, and NRVS spectroscopy, revealing molecular details of the coordination of the Fe(CN)<sub>2</sub>CO fragment. Moreover, biochemical assays in combination with spectroscopy, AlphaFold structure predictions, protein-ligand docking calculations, and crosslinking MS deciphered unexpected mechanistic aspects of the ATP requirement of HypCD, which we found to actually trigger the transfer of the Fe(CN)<sub>2</sub>CO fragment to the apo-hydrogenase.</p>\",\"PeriodicalId\":49,\"journal\":{\"name\":\"Journal of the American Chemical Society\",\"volume\":\" \",\"pages\":\"30976-30989\"},\"PeriodicalIF\":14.4000,\"publicationDate\":\"2024-11-13\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11565642/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Journal of the American Chemical Society\",\"FirstCategoryId\":\"92\",\"ListUrlMain\":\"https://doi.org/10.1021/jacs.4c09791\",\"RegionNum\":1,\"RegionCategory\":\"化学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/11/3 0:00:00\",\"PubModel\":\"Epub\",\"JCR\":\"Q1\",\"JCRName\":\"CHEMISTRY, MULTIDISCIPLINARY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Journal of the American Chemical Society","FirstCategoryId":"92","ListUrlMain":"https://doi.org/10.1021/jacs.4c09791","RegionNum":1,"RegionCategory":"化学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/11/3 0:00:00","PubModel":"Epub","JCR":"Q1","JCRName":"CHEMISTRY, MULTIDISCIPLINARY","Score":null,"Total":0}
引用次数: 0

摘要

[NiFe]-氢化酶利用独特的 NiFe(CN)2CO 金属位点催化 H2 的可逆活化,该金属位点由复杂的多蛋白机制组装而成。含[4Fe-4S]簇的 HypCD 复合物具有迄今未知功能的 ATPase 活性,是组装 Fe(CN)2CO 亚片段的枢纽。HypCD还被认为负责随后将铁片段转移到催化氢化酶亚基的apo-form上,但其内在机制仍未探明。在这里,我们利用红外光谱、莫斯鲍尔光谱和 NRVS 光谱对不同的 HypCD 制剂进行了全面的光谱表征,揭示了 Fe(CN)2CO 片段配位的分子细节。此外,结合光谱学、AlphaFold 结构预测、蛋白质配体对接计算和交联质谱进行的生化测定破译了 HypCD 对 ATP 需求的意想不到的机理方面,我们发现 ATP 实际上触发了 Fe(CN)2CO 片段转移到apo-hydrogenase。
本文章由计算机程序翻译,如有差异,请以英文原文为准。

ATP-Triggered Fe(CN)<sub>2</sub>CO Synthon Transfer from the Maturase HypCD to the Active Site of Apo-[NiFe]-Hydrogenase.

ATP-Triggered Fe(CN)2CO Synthon Transfer from the Maturase HypCD to the Active Site of Apo-[NiFe]-Hydrogenase.

[NiFe]-hydrogenases catalyze the reversible activation of H2 using a unique NiFe(CN)2CO metal site, which is assembled by a sophisticated multiprotein machinery. The [4Fe-4S] cluster-containing HypCD complex, which possesses an ATPase activity with a hitherto unknown function, serves as the hub for the assembly of the Fe(CN)2CO subfragment. HypCD is also thought to be responsible for the subsequent transfer of the iron fragment to the apo-form of the catalytic hydrogenase subunit, but the underlying mechanism has remained unexplored. Here, we performed a thorough spectroscopic characterization of different HypCD preparations using infrared, Mössbauer, and NRVS spectroscopy, revealing molecular details of the coordination of the Fe(CN)2CO fragment. Moreover, biochemical assays in combination with spectroscopy, AlphaFold structure predictions, protein-ligand docking calculations, and crosslinking MS deciphered unexpected mechanistic aspects of the ATP requirement of HypCD, which we found to actually trigger the transfer of the Fe(CN)2CO fragment to the apo-hydrogenase.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
CiteScore
24.40
自引率
6.00%
发文量
2398
审稿时长
1.6 months
期刊介绍: The flagship journal of the American Chemical Society, known as the Journal of the American Chemical Society (JACS), has been a prestigious publication since its establishment in 1879. It holds a preeminent position in the field of chemistry and related interdisciplinary sciences. JACS is committed to disseminating cutting-edge research papers, covering a wide range of topics, and encompasses approximately 19,000 pages of Articles, Communications, and Perspectives annually. With a weekly publication frequency, JACS plays a vital role in advancing the field of chemistry by providing essential research.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信