Sazid Hasan, Aida Brankovic, Md Abdul Awal, Sasan Ahdi Rezaeieh, Shelley E Keating, Amin M Abbosh, Ali Zamani
{"title":"HepNet:利用微波信号对早期肝脏脂肪变性进行分类的深度神经网络","authors":"Sazid Hasan, Aida Brankovic, Md Abdul Awal, Sasan Ahdi Rezaeieh, Shelley E Keating, Amin M Abbosh, Ali Zamani","doi":"10.1109/JBHI.2024.3489626","DOIUrl":null,"url":null,"abstract":"<p><p>Hepatic steatosis, a key factor in chronic liver diseases, is difficult to diagnose early. This study introduces a classifier for hepatic steatosis using microwave technology, validated through clinical trials. Our method uses microwave signals and deep learning to improve detection to reliable results. It includes a pipeline with simulation data, a new deep-learning model called HepNet, and transfer learning. The simulation data, created with 3D electromagnetic tools, is used for training and evaluating the model. HepNet uses skip connections in convolutional layers and two fully connected layers for better feature extraction and generalization. Calibration and uncertainty assessments ensure the model's robustness. Our simulation achieved an F1-score of 0.91 and a confidence level of 0.97 for classifications with entropy ≤0.1, outperforming traditional models like LeNet (0.81) and ResNet (0.87). We also use transfer learning to adapt HepNet to clinical data with limited patient samples. Using 1H-MRS as the standard for two microwave liver scanners, HepNet achieved high F1-scores of 0.95 and 0.88 for 94 and 158 patient samples, respectively, showing its clinical potential.</p>","PeriodicalId":13073,"journal":{"name":"IEEE Journal of Biomedical and Health Informatics","volume":"PP ","pages":""},"PeriodicalIF":6.7000,"publicationDate":"2024-10-31","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"HepNet: Deep Neural Network for Classification of Early-Stage Hepatic Steatosis Using Microwave Signals.\",\"authors\":\"Sazid Hasan, Aida Brankovic, Md Abdul Awal, Sasan Ahdi Rezaeieh, Shelley E Keating, Amin M Abbosh, Ali Zamani\",\"doi\":\"10.1109/JBHI.2024.3489626\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><p>Hepatic steatosis, a key factor in chronic liver diseases, is difficult to diagnose early. This study introduces a classifier for hepatic steatosis using microwave technology, validated through clinical trials. Our method uses microwave signals and deep learning to improve detection to reliable results. It includes a pipeline with simulation data, a new deep-learning model called HepNet, and transfer learning. The simulation data, created with 3D electromagnetic tools, is used for training and evaluating the model. HepNet uses skip connections in convolutional layers and two fully connected layers for better feature extraction and generalization. Calibration and uncertainty assessments ensure the model's robustness. Our simulation achieved an F1-score of 0.91 and a confidence level of 0.97 for classifications with entropy ≤0.1, outperforming traditional models like LeNet (0.81) and ResNet (0.87). We also use transfer learning to adapt HepNet to clinical data with limited patient samples. Using 1H-MRS as the standard for two microwave liver scanners, HepNet achieved high F1-scores of 0.95 and 0.88 for 94 and 158 patient samples, respectively, showing its clinical potential.</p>\",\"PeriodicalId\":13073,\"journal\":{\"name\":\"IEEE Journal of Biomedical and Health Informatics\",\"volume\":\"PP \",\"pages\":\"\"},\"PeriodicalIF\":6.7000,\"publicationDate\":\"2024-10-31\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"IEEE Journal of Biomedical and Health Informatics\",\"FirstCategoryId\":\"5\",\"ListUrlMain\":\"https://doi.org/10.1109/JBHI.2024.3489626\",\"RegionNum\":2,\"RegionCategory\":\"医学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q1\",\"JCRName\":\"COMPUTER SCIENCE, INFORMATION SYSTEMS\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"IEEE Journal of Biomedical and Health Informatics","FirstCategoryId":"5","ListUrlMain":"https://doi.org/10.1109/JBHI.2024.3489626","RegionNum":2,"RegionCategory":"医学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q1","JCRName":"COMPUTER SCIENCE, INFORMATION SYSTEMS","Score":null,"Total":0}
HepNet: Deep Neural Network for Classification of Early-Stage Hepatic Steatosis Using Microwave Signals.
Hepatic steatosis, a key factor in chronic liver diseases, is difficult to diagnose early. This study introduces a classifier for hepatic steatosis using microwave technology, validated through clinical trials. Our method uses microwave signals and deep learning to improve detection to reliable results. It includes a pipeline with simulation data, a new deep-learning model called HepNet, and transfer learning. The simulation data, created with 3D electromagnetic tools, is used for training and evaluating the model. HepNet uses skip connections in convolutional layers and two fully connected layers for better feature extraction and generalization. Calibration and uncertainty assessments ensure the model's robustness. Our simulation achieved an F1-score of 0.91 and a confidence level of 0.97 for classifications with entropy ≤0.1, outperforming traditional models like LeNet (0.81) and ResNet (0.87). We also use transfer learning to adapt HepNet to clinical data with limited patient samples. Using 1H-MRS as the standard for two microwave liver scanners, HepNet achieved high F1-scores of 0.95 and 0.88 for 94 and 158 patient samples, respectively, showing its clinical potential.
期刊介绍:
IEEE Journal of Biomedical and Health Informatics publishes original papers presenting recent advances where information and communication technologies intersect with health, healthcare, life sciences, and biomedicine. Topics include acquisition, transmission, storage, retrieval, management, and analysis of biomedical and health information. The journal covers applications of information technologies in healthcare, patient monitoring, preventive care, early disease diagnosis, therapy discovery, and personalized treatment protocols. It explores electronic medical and health records, clinical information systems, decision support systems, medical and biological imaging informatics, wearable systems, body area/sensor networks, and more. Integration-related topics like interoperability, evidence-based medicine, and secure patient data are also addressed.