斑马鱼脂维素与 L1-ORF2 的结合通过干扰组蛋白包裹增加了 L1-ORF2 的可及性。

IF 5.7 3区 医学 Q1 MEDICINE, RESEARCH & EXPERIMENTAL
International journal of molecular medicine Pub Date : 2025-01-01 Epub Date: 2024-10-25 DOI:10.3892/ijmm.2024.5443
Ning Ji, Chong-Guang Wu, Wen-Xia Wang, Xiao-Die Wang, Yu Zhai, Luqman Ali, Zhi-Xue Song, Guozhong Zhang, Xu Feng, Yu Wang, Zhan-Jun Lv, Xiufang Wang
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引用次数: 0

摘要

长穿插核元素-1(L1)在人类、啮齿类动物和鱼类的早期胚胎中高度表达。为了研究 L1 在早期胚胎发育过程中高表达的分子机制,我们构建了一个 C1-开放阅读框(ORF)2 载体,将人类 L1 的 ORF2(L1-ORF2)插入到 pEGFP-C1 质粒中。将 C1-ORF2 载体注入早期斑马鱼胚胎(EZEs),通过荧光显微镜观察 EGFP 报告蛋白的表达。利用RNA-seq和RT-qPCR检测脂维素(LV)对EZEs基因表达的影响。电泳迁移试验(EMSA)检测了 LV 与 L1-ORF2 DNA 的结合能力。染色质重组DNase I消化和ATAC-seq测定用于评估质粒DNA的可及性。将 C1-ORF2 载体注入受精后 0 h(hpf)的斑马鱼胚胎后,尽管组蛋白八聚体抑制了 C1-ORF2 中 EGFP 的表达,但它还是诱导了增强型绿色荧光蛋白(EGFP)报告基因的高表达。SDS-PAGE 技术表明,在受精后 0 hpf 的斑马鱼胚胎裂解液(ZEL)中,LV 是与 ORF2 DNA 结合的主要蛋白质。斑马鱼胚胎裂解液和从斑马鱼胚胎裂解液中纯化的 LV 都减弱了组蛋白的抑制作用。LV与组蛋白结合,干扰了组蛋白与ORF2 DNA的结合。体外染色质重组实验和用HeLa细胞测序法测定转座酶可访问染色质的实验都证明,LV的干扰作用导致C1-ORF2的可访问性增加。体外转录实验证实,LV 可提高斑马鱼早期胚胎表达基因粒头样转录因子 3(GRHL3)、SRY-盒转录因子 19a(SOX19A)和 nanor(NNR)以及 EGFP 基因的 mRNA 水平。将 LV 注入成年雄性斑马鱼的腹腔后,发现 LV 能提高斑马鱼早期胚胎表达基因在肝组织中的表达水平。综上所述,本研究结果表明,LV通过提高ORF2 DNA的可及性,激活了ORF2诱导的EGFP在EZEs中的表达。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Binding of zebrafish lipovitellin and L1‑ORF2 increases the accessibility of L1‑ORF2 via interference with histone wrapping.

Long interspersed nuclear element‑1 (L1) is highly expressed in the early embryos of humans, rodents and fish. To investigate the molecular mechanisms underlying high expression of L1 during early embryonic development, a C1‑open reading frame (ORF)2 vector was constructed in which ORF2 of human L1 (L1‑ORF2) was inserted into a pEGFP‑C1 plasmid. C1‑ORF2 vector was injected into early zebrafish embryos (EZEs) to observe expression of EGFP reporter protein by fluorescence microscopy. RNA‑seq and RT‑qPCR were used to detect the effects of lipovitellin (LV)  on gene expression in EZEs. The binding ability of LV to L1‑ORF2 DNA was detected by electrophoretic mobility‑shift assay (EMSA). The chromatin recombinant DNase I digestion and ATAC‑seq assay were used to evaluate the accessibility of plasmid DNA. C1‑ORF2 vector induced high expression of enhanced green fluorescent protein (EGFP) reporter gene after it had been injected into 0 h post‑fertilization (hpf) zebrafish embryos, although histone octamer inhibited expression of EGFP in C1‑ORF2. SDS‑PAGE was used to show that LV was the predominant protein binding ORF2 DNA in 0 hpf zebrafish embryo lysate (ZEL). Both ZEL and purified LV from ZEL attenuated the inhibitory effects induced by histone. LV bound histone to interfere with the binding of histone to ORF2 DNA. Both in vitro chromatin reconstitution experiments and assay for transposase‑accessible chromatin with sequencing with HeLa cells were utilized to demonstrate that the interference induced by LV resulted in increased accessibility of C1‑ORF2. Transcription experiments in vitro verified that LV could enhance the mRNA levels of zebrafish early embryo expression genes grainyhead‑like transcription factor 3 (GRHL3), SRY‑box transcription factor 19a (SOX19A) and nanor (NNR) and also of the EGFP gene. LV was found to increase the expression levels of the zebrafish early embryo expression genes in liver tissue after LV had been injected into the abdominal cavity of adult male zebrafish. Taken together, the findings of the present study demonstrated that LV activates the expression of EGFP induced by ORF2 in EZEs by enhancing the accessibility of ORF2 DNA.

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来源期刊
International journal of molecular medicine
International journal of molecular medicine 医学-医学:研究与实验
CiteScore
12.30
自引率
0.00%
发文量
124
审稿时长
3 months
期刊介绍: The main aim of Spandidos Publications is to facilitate scientific communication in a clear, concise and objective manner, while striving to provide prompt publication of original works of high quality. The journals largely concentrate on molecular and experimental medicine, oncology, clinical and experimental cancer treatment and biomedical research. All journals published by Spandidos Publications Ltd. maintain the highest standards of quality, and the members of their Editorial Boards are world-renowned scientists.
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