利用基于弱注释的深度学习的肺结节拟人化诊断系统。

IF 5.4 2区 医学 Q1 ENGINEERING, BIOMEDICAL
Lipeng Xie , Yongrui Xu , Mingfeng Zheng , Yundi Chen , Min Sun , Michael A. Archer , Wenjun Mao , Yubing Tong , Yuan Wan
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引用次数: 0

摘要

在 CT 扫描中对肺部结节进行准确分类是及时发现和诊断肺癌的一个重要方面。结节的等级和质地分类尤其重要,因为它可以帮助放射科医生和临床医生就结节的处理做出更明智的决定。然而,目前现有的结节分类技术只有单一的结节分类功能,并且依赖于大量高质量的注释数据,无法满足临床实践的要求。为解决这一问题,我们开发了一种基于深度学习(DL)的肺结节(PN)拟人诊断系统,该系统由弱注释数据训练而成,性能与基于全注释的诊断系统相当。该系统利用深度学习模型对弱注释的肺结节进行分类(良性与恶性),从而无需对肺结节进行耗时耗力的人工注释。此外,通过球尺度变换技术获得的手工形状特征增强了 PN 分类网络,证明它有能力区分不同标签的 PN,包括纯磨玻璃不透明、部分实性结节和实性结节。通过在两个数据集上进行 5 倍交叉验证,该系统取得了以下结果:(1)在由 814 个测试病例组成的 LIDC-IDRI 数据集上,PN 定位的曲线下面积(AUC)为 0.938,PN 鉴别诊断的曲线下面积(AUC)为 0.912;(2)在由 822 个测试病例组成的内部数据集上,PN 定位的曲线下面积(AUC)为 0.943,PN 鉴别诊断的曲线下面积(AUC)为 0.815。总之,我们的系统能在资源有限的环境下对 PN 进行有效的定位和鉴别诊断,因此将来可以应用于临床。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
An anthropomorphic diagnosis system of pulmonary nodules using weak annotation-based deep learning
The accurate categorization of lung nodules in CT scans is an essential aspect in the prompt detection and diagnosis of lung cancer. The categorization of grade and texture for nodules is particularly significant since it can aid radiologists and clinicians to make better-informed decisions concerning the management of nodules. However, currently existing nodule classification techniques have a singular function of nodule classification and rely on an extensive amount of high-quality annotation data, which does not meet the requirements of clinical practice. To address this issue, we develop an anthropomorphic diagnosis system of pulmonary nodules (PN) based on deep learning (DL) that is trained by weak annotation data and has comparable performance to full-annotation based diagnosis systems. The proposed system uses DL models to classify PNs (benign vs. malignant) with weak annotations, which eliminates the need for time-consuming and labor-intensive manual annotations of PNs. Moreover, the PN classification networks, augmented with handcrafted shape features acquired through the ball-scale transform technique, demonstrate capability to differentiate PNs with diverse labels, including pure ground-glass opacities, part-solid nodules, and solid nodules. Through 5-fold cross-validation on two datasets, the system achieved the following results: (1) an Area Under Curve (AUC) of 0.938 for PN localization and an AUC of 0.912 for PN differential diagnosis on the LIDC-IDRI dataset of 814 testing cases, (2) an AUC of 0.943 for PN localization and an AUC of 0.815 for PN differential diagnosis on the in-house dataset of 822 testing cases. In summary, our system demonstrates efficient localization and differential diagnosis of PNs in a resource limited environment, and thus could be translated into clinical use in the future.
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来源期刊
CiteScore
10.70
自引率
3.50%
发文量
71
审稿时长
26 days
期刊介绍: The purpose of the journal Computerized Medical Imaging and Graphics is to act as a source for the exchange of research results concerning algorithmic advances, development, and application of digital imaging in disease detection, diagnosis, intervention, prevention, precision medicine, and population health. Included in the journal will be articles on novel computerized imaging or visualization techniques, including artificial intelligence and machine learning, augmented reality for surgical planning and guidance, big biomedical data visualization, computer-aided diagnosis, computerized-robotic surgery, image-guided therapy, imaging scanning and reconstruction, mobile and tele-imaging, radiomics, and imaging integration and modeling with other information relevant to digital health. The types of biomedical imaging include: magnetic resonance, computed tomography, ultrasound, nuclear medicine, X-ray, microwave, optical and multi-photon microscopy, video and sensory imaging, and the convergence of biomedical images with other non-imaging datasets.
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