预测大脑白质组织异质硬度图的理论框架

IF 2 4区 生物学 Q4 BIOCHEMISTRY & MOLECULAR BIOLOGY
Poorya Chavoshnejad, Guangfa Li, Akbar Solhtalab, Dehao Liu, Mir Jalil Razavi
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引用次数: 0

摘要

找到生物组织的刚度图对于评估其健康或病理状况非常重要。然而,由于生物纤维组织的异质性和各向异性,如果仅通过单模加载实验来确定其特征,这项任务就会面临挑战和极大的不确定性。在本研究中,我们提出了一个新的理论框架,用于绘制纤维组织的刚度图,尤其侧重于脑白质组织。首先,对纤维组织的有限元模型施加六种加载情况,并对其相应的应力-应变曲线进行表征。通过多目标优化,反向提取了等效各向异性材料模型的材料常数,以同时最佳地拟合所有六种加载模式。随后,结合各种纤维体积分数和方向,进行了大规模有限元模拟,以训练一个卷积神经网络,该网络能够完全根据任何给定组织的纤维结构预测等效各向异性材料特性。该方法利用脑纤维束成像技术,应用于白质的局部体积,证明了其在精确绘制纤维组织各向异性行为方面的有效性。从长远来看,该方法可应用于脑外伤、大脑折叠研究和神经退行性疾病,在这些领域,准确捕捉组织的材料行为对模拟和实验至关重要。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A theoretical framework for predicting the heterogeneous stiffness map of brain white matter tissue.

Finding the stiffness map of biological tissues is of great importance in evaluating their healthy or pathological conditions. However, due to the heterogeneity and anisotropy of biological fibrous tissues, this task presents challenges and significant uncertainty when characterized only by single-mode loading experiments. In this study, we propose a new theoretical framework to map the stiffness landscape of fibrous tissues, specifically focusing on brain white matter tissue. Initially, a finite element (FE) model of the fibrous tissue was subjected to six loading cases, and their corresponding stress-strain curves were characterized. By employing multiobjective optimization, the material constants of an equivalent anisotropic material model were inversely extracted to best fit all six loading modes simultaneously. Subsequently, large-scale FE simulations were conducted, incorporating various fiber volume fractions and orientations, to train a convolutional neural network capable of predicting the equivalent anisotropic material properties solely based on the fibrous architecture of any given tissue. The proposed method, leveraging brain fiber tractography, was applied to a localized volume of white matter, demonstrating its effectiveness in precisely mapping the anisotropic behavior of fibrous tissue. In the long-term, the proposed method may find applications in traumatic brain injury, brain folding studies, and neurodegenerative diseases, where accurately capturing the material behavior of the tissue is crucial for simulations and experiments.

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来源期刊
Physical biology
Physical biology 生物-生物物理
CiteScore
4.20
自引率
0.00%
发文量
50
审稿时长
3 months
期刊介绍: Physical Biology publishes articles in the broad interdisciplinary field bridging biology with the physical sciences and engineering. This journal focuses on research in which quantitative approaches – experimental, theoretical and modeling – lead to new insights into biological systems at all scales of space and time, and all levels of organizational complexity. Physical Biology accepts contributions from a wide range of biological sub-fields, including topics such as: molecular biophysics, including single molecule studies, protein-protein and protein-DNA interactions subcellular structures, organelle dynamics, membranes, protein assemblies, chromosome structure intracellular processes, e.g. cytoskeleton dynamics, cellular transport, cell division systems biology, e.g. signaling, gene regulation and metabolic networks cells and their microenvironment, e.g. cell mechanics and motility, chemotaxis, extracellular matrix, biofilms cell-material interactions, e.g. biointerfaces, electrical stimulation and sensing, endocytosis cell-cell interactions, cell aggregates, organoids, tissues and organs developmental dynamics, including pattern formation and morphogenesis physical and evolutionary aspects of disease, e.g. cancer progression, amyloid formation neuronal systems, including information processing by networks, memory and learning population dynamics, ecology, and evolution collective action and emergence of collective phenomena.
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