多组学分析揭示了 H2O2- 对 Thamnaconus septentrionalis 产生有害影响的分子机制。

IF 3.5 2区 生物学 Q2 BIOTECHNOLOGY & APPLIED MICROBIOLOGY
Chengcheng Li, Xuanxuan Zhang, Linlin Zhao, Shenghao Liu
{"title":"多组学分析揭示了 H2O2- 对 Thamnaconus septentrionalis 产生有害影响的分子机制。","authors":"Chengcheng Li, Xuanxuan Zhang, Linlin Zhao, Shenghao Liu","doi":"10.1186/s12864-024-10903-0","DOIUrl":null,"url":null,"abstract":"<p><strong>Background: </strong>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>), a novel water treatment agent, can be used for disinfection, water quality adjustment, and disease prevention, while excessive H<sub>2</sub>O<sub>2</sub> can injure farm animals, even leading to death. Hydrogen peroxide is a recommended disinfectant and bactericide for treating gill diseases and vibriosis in the greenfin horse-faced filefish Thamnaconus septentrionalis. However, its cumulative effect, toxic molecular mechanism and relevant signal transduction/metabolic networks in marine fishes are largely unknown.</p><p><strong>Results: </strong>We employed a multi-omics approach to investigate the detrimental effects of 50 mg/L H<sub>2</sub>O<sub>2</sub> exposure (2 h/d) on filefish for 2 d, 4 d, and 6 d. Transcriptome sequencing showed that differentially expressed genes (DEGs) were mainly classified into functions such as signal transduction, nervous system, liver and bile acid metabolism, energy metabolism, cell adhesion and communication, inflammation and immune response. Metabolomic analysis found that the significantly changed metabolites (SCMs) were involved in phenylalanine metabolism, inflammatory mediator regulation, linoleic acid metabolism, and necroptosis. The main SCMs were cholic acid, carnitine C12:1, dimethylmalonic acid, glutamic acid, L-lactic acid, shikimic acid, 2-methylsuccinic acid, and others. Moreover, H<sub>2</sub>O<sub>2</sub>-induced oxidative stress also disturbs the balance of the gut microbiota, altering the microbial composition and affecting digestive processes.</p><p><strong>Conclusions: </strong>Integrated multiomics analysis revealed that H<sub>2</sub>O<sub>2</sub>-induced detrimental impacts include mucosal damage, inflammatory and immune responses, altered energy metabolism, and gut microbiota disorders. These findings offer novel insights into the harmful effects and signal transduction/metabolic pathways triggered by H<sub>2</sub>O<sub>2</sub> exposure in marine fishes.</p>","PeriodicalId":9030,"journal":{"name":"BMC Genomics","volume":null,"pages":null},"PeriodicalIF":3.5000,"publicationDate":"2024-10-21","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492787/pdf/","citationCount":"0","resultStr":"{\"title\":\"Multi-omics profiling reveals the molecular mechanisms of H<sub>2</sub>O<sub>2</sub>-induced detrimental effects on Thamnaconus septentrionalis.\",\"authors\":\"Chengcheng Li, Xuanxuan Zhang, Linlin Zhao, Shenghao Liu\",\"doi\":\"10.1186/s12864-024-10903-0\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Background: </strong>Hydrogen peroxide (H<sub>2</sub>O<sub>2</sub>), a novel water treatment agent, can be used for disinfection, water quality adjustment, and disease prevention, while excessive H<sub>2</sub>O<sub>2</sub> can injure farm animals, even leading to death. Hydrogen peroxide is a recommended disinfectant and bactericide for treating gill diseases and vibriosis in the greenfin horse-faced filefish Thamnaconus septentrionalis. However, its cumulative effect, toxic molecular mechanism and relevant signal transduction/metabolic networks in marine fishes are largely unknown.</p><p><strong>Results: </strong>We employed a multi-omics approach to investigate the detrimental effects of 50 mg/L H<sub>2</sub>O<sub>2</sub> exposure (2 h/d) on filefish for 2 d, 4 d, and 6 d. Transcriptome sequencing showed that differentially expressed genes (DEGs) were mainly classified into functions such as signal transduction, nervous system, liver and bile acid metabolism, energy metabolism, cell adhesion and communication, inflammation and immune response. Metabolomic analysis found that the significantly changed metabolites (SCMs) were involved in phenylalanine metabolism, inflammatory mediator regulation, linoleic acid metabolism, and necroptosis. The main SCMs were cholic acid, carnitine C12:1, dimethylmalonic acid, glutamic acid, L-lactic acid, shikimic acid, 2-methylsuccinic acid, and others. Moreover, H<sub>2</sub>O<sub>2</sub>-induced oxidative stress also disturbs the balance of the gut microbiota, altering the microbial composition and affecting digestive processes.</p><p><strong>Conclusions: </strong>Integrated multiomics analysis revealed that H<sub>2</sub>O<sub>2</sub>-induced detrimental impacts include mucosal damage, inflammatory and immune responses, altered energy metabolism, and gut microbiota disorders. These findings offer novel insights into the harmful effects and signal transduction/metabolic pathways triggered by H<sub>2</sub>O<sub>2</sub> exposure in marine fishes.</p>\",\"PeriodicalId\":9030,\"journal\":{\"name\":\"BMC Genomics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":3.5000,\"publicationDate\":\"2024-10-21\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11492787/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"BMC Genomics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.1186/s12864-024-10903-0\",\"RegionNum\":2,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"BIOTECHNOLOGY & APPLIED MICROBIOLOGY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"BMC Genomics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.1186/s12864-024-10903-0","RegionNum":2,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"BIOTECHNOLOGY & APPLIED MICROBIOLOGY","Score":null,"Total":0}
引用次数: 0

摘要

背景:过氧化氢(H2O2)是一种新型水处理剂,可用于消毒、调节水质和预防疾病,但过量的 H2O2 会伤害养殖动物,甚至导致死亡。双氧水是一种推荐的消毒剂和杀菌剂,可用于治疗青鳍马面锉刀鱼(Thamnaconus septentrionalis)的鳃病和弧菌病。然而,过氧化氢在海洋鱼类中的累积效应、毒性分子机制以及相关的信号转导/代谢网络在很大程度上都是未知的:转录组测序显示,差异表达基因(DEGs)主要分为信号转导、神经系统、肝脏和胆汁酸代谢、能量代谢、细胞粘附和通讯、炎症和免疫反应等功能。代谢组学分析发现,显著变化的代谢物(SCMs)涉及苯丙氨酸代谢、炎症介质调节、亚油酸代谢和坏死。主要的SCM有胆酸、肉碱C12:1、二甲基丙二酸、谷氨酸、L-乳酸、莽草酸、2-甲基琥珀酸等。此外,H2O2 诱导的氧化应激还会扰乱肠道微生物群的平衡,改变微生物组成,影响消化过程:综合多组学分析表明,H2O2 引发的有害影响包括粘膜损伤、炎症和免疫反应、能量代谢改变以及肠道微生物群紊乱。这些发现为了解海洋鱼类暴露于 H2O2 引发的有害影响和信号转导/代谢途径提供了新的视角。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Multi-omics profiling reveals the molecular mechanisms of H2O2-induced detrimental effects on Thamnaconus septentrionalis.

Background: Hydrogen peroxide (H2O2), a novel water treatment agent, can be used for disinfection, water quality adjustment, and disease prevention, while excessive H2O2 can injure farm animals, even leading to death. Hydrogen peroxide is a recommended disinfectant and bactericide for treating gill diseases and vibriosis in the greenfin horse-faced filefish Thamnaconus septentrionalis. However, its cumulative effect, toxic molecular mechanism and relevant signal transduction/metabolic networks in marine fishes are largely unknown.

Results: We employed a multi-omics approach to investigate the detrimental effects of 50 mg/L H2O2 exposure (2 h/d) on filefish for 2 d, 4 d, and 6 d. Transcriptome sequencing showed that differentially expressed genes (DEGs) were mainly classified into functions such as signal transduction, nervous system, liver and bile acid metabolism, energy metabolism, cell adhesion and communication, inflammation and immune response. Metabolomic analysis found that the significantly changed metabolites (SCMs) were involved in phenylalanine metabolism, inflammatory mediator regulation, linoleic acid metabolism, and necroptosis. The main SCMs were cholic acid, carnitine C12:1, dimethylmalonic acid, glutamic acid, L-lactic acid, shikimic acid, 2-methylsuccinic acid, and others. Moreover, H2O2-induced oxidative stress also disturbs the balance of the gut microbiota, altering the microbial composition and affecting digestive processes.

Conclusions: Integrated multiomics analysis revealed that H2O2-induced detrimental impacts include mucosal damage, inflammatory and immune responses, altered energy metabolism, and gut microbiota disorders. These findings offer novel insights into the harmful effects and signal transduction/metabolic pathways triggered by H2O2 exposure in marine fishes.

求助全文
通过发布文献求助,成功后即可免费获取论文全文。 去求助
来源期刊
BMC Genomics
BMC Genomics 生物-生物工程与应用微生物
CiteScore
7.40
自引率
4.50%
发文量
769
审稿时长
6.4 months
期刊介绍: BMC Genomics is an open access, peer-reviewed journal that considers articles on all aspects of genome-scale analysis, functional genomics, and proteomics. BMC Genomics is part of the BMC series which publishes subject-specific journals focused on the needs of individual research communities across all areas of biology and medicine. We offer an efficient, fair and friendly peer review service, and are committed to publishing all sound science, provided that there is some advance in knowledge presented by the work.
×
引用
GB/T 7714-2015
复制
MLA
复制
APA
复制
导出至
BibTeX EndNote RefMan NoteFirst NoteExpress
×
提示
您的信息不完整,为了账户安全,请先补充。
现在去补充
×
提示
您因"违规操作"
具体请查看互助需知
我知道了
×
提示
确定
请完成安全验证×
copy
已复制链接
快去分享给好友吧!
我知道了
右上角分享
点击右上角分享
0
联系我们:info@booksci.cn Book学术提供免费学术资源搜索服务,方便国内外学者检索中英文文献。致力于提供最便捷和优质的服务体验。 Copyright © 2023 布克学术 All rights reserved.
京ICP备2023020795号-1
ghs 京公网安备 11010802042870号
Book学术文献互助
Book学术文献互助群
群 号:481959085
Book学术官方微信