Said Charfi, Mohamed EL Ansari, Lahcen Koutti, Ilyas ELjaafari, Ayoub ELLahyani
{"title":"基于特征金字塔网络的空间注意力和跨层语义相似性用于胶囊内窥镜图像的疾病分割","authors":"Said Charfi, Mohamed EL Ansari, Lahcen Koutti, Ilyas ELjaafari, Ayoub ELLahyani","doi":"10.1002/ima.23194","DOIUrl":null,"url":null,"abstract":"<div>\n \n <p>As an emerging technology that uses a pill-sized camera to visualize images of the digestive tract. Wireless capsule endoscopy (WCE) presents several advantages, since it is far less invasive, does not need sedation and has less possible complications compared to standard endoscopy. Hence, it might be exploited as alternative to the standard procedure. WCE is used to diagnosis a variety of gastro-intestinal diseases such as polyps, ulcers, crohns disease, and hemorrhages. Nevertheless, WCE videos produced after a test may consist of thousands of frames per patient that must be viewed by medical specialists, besides, the capsule free mobility and technological limits cause production of a low quality images. Hence, development of an automatic tool based on artificial intelligence might be very helpful. Moreover, most state-of-the-art works aim at images classification (normal/abnormal) while ignoring diseases segmentation. Therefore, in this work a novel method based on Feature Pyramid Network model is presented. This approach aims at diseases segmentation from WCE images. In this model, modules to optimize and combine features were employed. Specifically, semantic and spatial features were mutually compensated by spatial attention and cross-level global feature fusion modules. The proposed method testing F1-score and mean intersection over union are 94.149% and 89.414%, respectively, in the MICCAI 2017 dataset. In the KID Atlas dataset, the method achieved a testing F1-score and mean intersection over union of 94.557% and 90.416%, respectively. Through the performance analysis, the mean intersection over union in the MICCAI 2017 dataset is 20.414%, 18.484%, 11.444%, 8.794% more than existing approaches. Moreover, the proposed scheme surpassed the methods used for comparison by 29.986% and 9.416% in terms of mean intersection over union in KID Atlas dataset. These results indicate that the proposed approach is promising in diseases segmentation from WCE images.</p>\n </div>","PeriodicalId":14027,"journal":{"name":"International Journal of Imaging Systems and Technology","volume":"34 6","pages":""},"PeriodicalIF":3.0000,"publicationDate":"2024-10-07","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"","citationCount":"0","resultStr":"{\"title\":\"Feature Pyramid Network Based Spatial Attention and Cross-Level Semantic Similarity for Diseases Segmentation From Capsule Endoscopy Images\",\"authors\":\"Said Charfi, Mohamed EL Ansari, Lahcen Koutti, Ilyas ELjaafari, Ayoub ELLahyani\",\"doi\":\"10.1002/ima.23194\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<div>\\n \\n <p>As an emerging technology that uses a pill-sized camera to visualize images of the digestive tract. Wireless capsule endoscopy (WCE) presents several advantages, since it is far less invasive, does not need sedation and has less possible complications compared to standard endoscopy. Hence, it might be exploited as alternative to the standard procedure. WCE is used to diagnosis a variety of gastro-intestinal diseases such as polyps, ulcers, crohns disease, and hemorrhages. Nevertheless, WCE videos produced after a test may consist of thousands of frames per patient that must be viewed by medical specialists, besides, the capsule free mobility and technological limits cause production of a low quality images. Hence, development of an automatic tool based on artificial intelligence might be very helpful. Moreover, most state-of-the-art works aim at images classification (normal/abnormal) while ignoring diseases segmentation. Therefore, in this work a novel method based on Feature Pyramid Network model is presented. This approach aims at diseases segmentation from WCE images. In this model, modules to optimize and combine features were employed. Specifically, semantic and spatial features were mutually compensated by spatial attention and cross-level global feature fusion modules. The proposed method testing F1-score and mean intersection over union are 94.149% and 89.414%, respectively, in the MICCAI 2017 dataset. In the KID Atlas dataset, the method achieved a testing F1-score and mean intersection over union of 94.557% and 90.416%, respectively. Through the performance analysis, the mean intersection over union in the MICCAI 2017 dataset is 20.414%, 18.484%, 11.444%, 8.794% more than existing approaches. Moreover, the proposed scheme surpassed the methods used for comparison by 29.986% and 9.416% in terms of mean intersection over union in KID Atlas dataset. These results indicate that the proposed approach is promising in diseases segmentation from WCE images.</p>\\n </div>\",\"PeriodicalId\":14027,\"journal\":{\"name\":\"International Journal of Imaging Systems and Technology\",\"volume\":\"34 6\",\"pages\":\"\"},\"PeriodicalIF\":3.0000,\"publicationDate\":\"2024-10-07\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"International Journal of Imaging Systems and Technology\",\"FirstCategoryId\":\"94\",\"ListUrlMain\":\"https://onlinelibrary.wiley.com/doi/10.1002/ima.23194\",\"RegionNum\":4,\"RegionCategory\":\"计算机科学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"\",\"PubModel\":\"\",\"JCR\":\"Q2\",\"JCRName\":\"ENGINEERING, ELECTRICAL & ELECTRONIC\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"International Journal of Imaging Systems and Technology","FirstCategoryId":"94","ListUrlMain":"https://onlinelibrary.wiley.com/doi/10.1002/ima.23194","RegionNum":4,"RegionCategory":"计算机科学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"","PubModel":"","JCR":"Q2","JCRName":"ENGINEERING, ELECTRICAL & ELECTRONIC","Score":null,"Total":0}
Feature Pyramid Network Based Spatial Attention and Cross-Level Semantic Similarity for Diseases Segmentation From Capsule Endoscopy Images
As an emerging technology that uses a pill-sized camera to visualize images of the digestive tract. Wireless capsule endoscopy (WCE) presents several advantages, since it is far less invasive, does not need sedation and has less possible complications compared to standard endoscopy. Hence, it might be exploited as alternative to the standard procedure. WCE is used to diagnosis a variety of gastro-intestinal diseases such as polyps, ulcers, crohns disease, and hemorrhages. Nevertheless, WCE videos produced after a test may consist of thousands of frames per patient that must be viewed by medical specialists, besides, the capsule free mobility and technological limits cause production of a low quality images. Hence, development of an automatic tool based on artificial intelligence might be very helpful. Moreover, most state-of-the-art works aim at images classification (normal/abnormal) while ignoring diseases segmentation. Therefore, in this work a novel method based on Feature Pyramid Network model is presented. This approach aims at diseases segmentation from WCE images. In this model, modules to optimize and combine features were employed. Specifically, semantic and spatial features were mutually compensated by spatial attention and cross-level global feature fusion modules. The proposed method testing F1-score and mean intersection over union are 94.149% and 89.414%, respectively, in the MICCAI 2017 dataset. In the KID Atlas dataset, the method achieved a testing F1-score and mean intersection over union of 94.557% and 90.416%, respectively. Through the performance analysis, the mean intersection over union in the MICCAI 2017 dataset is 20.414%, 18.484%, 11.444%, 8.794% more than existing approaches. Moreover, the proposed scheme surpassed the methods used for comparison by 29.986% and 9.416% in terms of mean intersection over union in KID Atlas dataset. These results indicate that the proposed approach is promising in diseases segmentation from WCE images.
期刊介绍:
The International Journal of Imaging Systems and Technology (IMA) is a forum for the exchange of ideas and results relevant to imaging systems, including imaging physics and informatics. The journal covers all imaging modalities in humans and animals.
IMA accepts technically sound and scientifically rigorous research in the interdisciplinary field of imaging, including relevant algorithmic research and hardware and software development, and their applications relevant to medical research. The journal provides a platform to publish original research in structural and functional imaging.
The journal is also open to imaging studies of the human body and on animals that describe novel diagnostic imaging and analyses methods. Technical, theoretical, and clinical research in both normal and clinical populations is encouraged. Submissions describing methods, software, databases, replication studies as well as negative results are also considered.
The scope of the journal includes, but is not limited to, the following in the context of biomedical research:
Imaging and neuro-imaging modalities: structural MRI, functional MRI, PET, SPECT, CT, ultrasound, EEG, MEG, NIRS etc.;
Neuromodulation and brain stimulation techniques such as TMS and tDCS;
Software and hardware for imaging, especially related to human and animal health;
Image segmentation in normal and clinical populations;
Pattern analysis and classification using machine learning techniques;
Computational modeling and analysis;
Brain connectivity and connectomics;
Systems-level characterization of brain function;
Neural networks and neurorobotics;
Computer vision, based on human/animal physiology;
Brain-computer interface (BCI) technology;
Big data, databasing and data mining.