Lin Zhang, Jigen Peng, Yongbin Ge, Haiyang Li, Yuchao Tang
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High-Accuracy Positivity-Preserving Finite Difference Approximations of the Chemotaxis Model for Tumor Invasion.
Numerical simulation of the complex evolution process for tumor invasion plays an extremely important role in-depth exploring the bio-taxis phenomena of tumor growth and metastasis. In view of the fact that low-accuracy numerical methods often have large errors and low resolution, very refined grids have to be used if we want to get high-resolution simulating results, which leads to a great deal of computational cost. In this paper, we are committed to developing a class of high-accuracy positivity-preserving finite difference methods to solve the chemotaxis model for tumor invasion. First, two unconditionally stable implicit compact difference schemes for solving the model are proposed; second, the local truncation errors of the new schemes are analyzed, which show that they have second-order accuracy in time and fourth-order accuracy in space; third, based on the proposed schemes, the high-accuracy numerical integration idea of binary functions is employed to structure a linear compact weighting formula that guarantees fourth-order accuracy and nonnegative, and then a positivity-preserving and time-marching algorithm is established; and finally, the accuracy, stability, and positivity-preserving of the proposed methods are verified by several numerical experiments, and the evolution phenomena of tumor invasion over time are numerically simulated and analyzed.
期刊介绍:
Journal of Computational Biology is the leading peer-reviewed journal in computational biology and bioinformatics, publishing in-depth statistical, mathematical, and computational analysis of methods, as well as their practical impact. Available only online, this is an essential journal for scientists and students who want to keep abreast of developments in bioinformatics.
Journal of Computational Biology coverage includes:
-Genomics
-Mathematical modeling and simulation
-Distributed and parallel biological computing
-Designing biological databases
-Pattern matching and pattern detection
-Linking disparate databases and data
-New tools for computational biology
-Relational and object-oriented database technology for bioinformatics
-Biological expert system design and use
-Reasoning by analogy, hypothesis formation, and testing by machine
-Management of biological databases