采用迭代优化策略的级联 FAS-UNet+ 框架,用于分割风险器官。

IF 2.6 4区 医学 Q2 COMPUTER SCIENCE, INTERDISCIPLINARY APPLICATIONS
Hui Zhu, Shi Shu, Jianping Zhang
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引用次数: 0

摘要

胸部危险器官(OAR)的分割在肺癌和食道癌的放射治疗中起着至关重要的作用。虽然对危险器官的自动分割已经进行了广泛研究,但由于器官的大小和形状各不相同,而且目标与背景之间的对比度较低,因此自动分割仍然具有挑战性。本文提出了一种级联 FAS-UNet+ 框架,该框架集成了卷积神经网络和非线性多网格理论,以求解用于分割 OARs 的修正 Mumford-shah 模型。该框架配备了增强型迭代块、从粗到细的多尺度架构、迭代优化策略和模型集合技术。增强迭代模块旨在提取多尺度特征,而级联模块则用于完善粗分割预测。迭代优化策略可改进网络参数,避免出现不利的局部极小值。此外,还开发了一种高效的数据增强方法来训练网络,从而显著提高了网络的性能。在预测阶段,加权集合技术结合了多个模型的预测结果,以完善最终的分割结果。在 SegTHOR 数据集上对所提出的级联 FAS-UNet+ 框架进行了评估,结果表明 Dice 分数和 Hausdorff Distance (HD) 均有显著提高。在官方无标记数据集中,主动脉和心脏的 Dice 分数分别为 95.22%、95.68%,HD 值分别为 0.1024 和 0.1194。我们的代码和训练好的模型可在 https://github.com/zhuhui100/C-FASUNet-plus 上获取。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
A cascaded FAS-UNet+ framework with iterative optimization strategy for segmentation of organs at risk.

Segmentation of organs at risks (OARs) in the thorax plays a critical role in radiation therapy for lung and esophageal cancer. Although automatic segmentation of OARs has been extensively studied, it remains challenging due to the varying sizes and shapes of organs, as well as the low contrast between the target and background. This paper proposes a cascaded FAS-UNet+ framework, which integrates convolutional neural networks and nonlinear multi-grid theory to solve a modified Mumford-shah model for segmenting OARs. This framework is equipped with an enhanced iteration block, a coarse-to-fine multiscale architecture, an iterative optimization strategy, and a model ensemble technique. The enhanced iteration block aims to extract multiscale features, while the cascade module is used to refine coarse segmentation predictions. The iterative optimization strategy improves the network parameters to avoid unfavorable local minima. An efficient data augmentation method is also developed to train the network, which significantly improves its performance. During the prediction stage, a weighted ensemble technique combines predictions from multiple models to refine the final segmentation. The proposed cascaded FAS-UNet+ framework was evaluated on the SegTHOR dataset, and the results demonstrate significant improvements in Dice score and Hausdorff Distance (HD). The Dice scores were 95.22%, 95.68%, and HD values were 0.1024, and 0.1194 for the segmentations of the aorta and heart in the official unlabeled dataset, respectively. Our code and trained models are available at https://github.com/zhuhui100/C-FASUNet-plus .

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来源期刊
Medical & Biological Engineering & Computing
Medical & Biological Engineering & Computing 医学-工程:生物医学
CiteScore
6.00
自引率
3.10%
发文量
249
审稿时长
3.5 months
期刊介绍: Founded in 1963, Medical & Biological Engineering & Computing (MBEC) continues to serve the biomedical engineering community, covering the entire spectrum of biomedical and clinical engineering. The journal presents exciting and vital experimental and theoretical developments in biomedical science and technology, and reports on advances in computer-based methodologies in these multidisciplinary subjects. The journal also incorporates new and evolving technologies including cellular engineering and molecular imaging. MBEC publishes original research articles as well as reviews and technical notes. Its Rapid Communications category focuses on material of immediate value to the readership, while the Controversies section provides a forum to exchange views on selected issues, stimulating a vigorous and informed debate in this exciting and high profile field. MBEC is an official journal of the International Federation of Medical and Biological Engineering (IFMBE).
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