Lingna Deng, Jinbang Li, Zhanlong Qiu, Yanfen Wang
{"title":"华南地区 NSCLC 患者的驱动基因改变及其与临床病理特征的相关性。","authors":"Lingna Deng, Jinbang Li, Zhanlong Qiu, Yanfen Wang","doi":"10.3389/fgene.2024.1455502","DOIUrl":null,"url":null,"abstract":"<p><strong>Introduction: </strong>In this study, we aimed to explore the relationship between clinicopathological features and driver gene changes in Chinese NSCLC patients.</p><p><strong>Methods: </strong>Amplification refractory mutation system PCR was used to detect the aberrations of 10 driver oncogenes in 851 Chinese NSCLC patients, and their correlation with clinicopathological characteristics was also analyzed. Moreover, three models of logistic regression were used to analyze the association between histopathology and <i>EGFR</i> or <i>KRAS</i> mutations.</p><p><strong>Results: </strong>The top two most frequently aberrant target oncogenes were <i>EGFR</i> (48.06%) and <i>KRAS</i> (9.51%). These were followed by <i>ALK</i> (5.41%), <i>HER2</i> (2.35%), <i>MET</i> (2.23%), <i>RET</i> (2.11%), <i>ROS1</i> (1.88%), <i>BRAF</i> (0.47%), <i>NRAS</i> (0.24%), and <i>PIK3CA</i> (0.12%). Additionally, 11 (1.29%) patients had synchronous gene alterations in two genes. The main <i>EGFR</i> mutations were exon 21 L858R and exon 19-Del, which accounted for 45.97% and 42.79% of all <i>EGFR</i> mutations, respectively. Logistic regression analysis showed that the frequency of <i>EGFR</i> mutations was positively correlated with women, non-smokers, lung adenocarcinoma, and invasive non-mucinous adenocarcinoma (IA), and negatively correlated with solid nodule, micro-invasive adenocarcinoma, and solid-predominant adenocarcinoma. <i>KRAS</i> mutations were positively associated with men and longer tumor long diameters and negatively correlated with lung adenocarcinoma (<i>P < 0.05</i> for all).</p><p><strong>Conclusion: </strong>Our findings suggest that the <i>EGFR</i> mutation frequency was higher in women, non-smokers, lung adenocarcinoma, and the IA subtype in lung adenocarcinoma patients, while the <i>KRAS</i> mutation rate was higher in men and patients with longer tumor long diameter and lower in lung adenocarcinoma patients.</p>","PeriodicalId":12750,"journal":{"name":"Frontiers in Genetics","volume":null,"pages":null},"PeriodicalIF":2.8000,"publicationDate":"2024-09-19","publicationTypes":"Journal Article","fieldsOfStudy":null,"isOpenAccess":false,"openAccessPdf":"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11446855/pdf/","citationCount":"0","resultStr":"{\"title\":\"Driver gene alterations in NSCLC patients in southern China and their correlation with clinicopathologic characteristics.\",\"authors\":\"Lingna Deng, Jinbang Li, Zhanlong Qiu, Yanfen Wang\",\"doi\":\"10.3389/fgene.2024.1455502\",\"DOIUrl\":null,\"url\":null,\"abstract\":\"<p><strong>Introduction: </strong>In this study, we aimed to explore the relationship between clinicopathological features and driver gene changes in Chinese NSCLC patients.</p><p><strong>Methods: </strong>Amplification refractory mutation system PCR was used to detect the aberrations of 10 driver oncogenes in 851 Chinese NSCLC patients, and their correlation with clinicopathological characteristics was also analyzed. Moreover, three models of logistic regression were used to analyze the association between histopathology and <i>EGFR</i> or <i>KRAS</i> mutations.</p><p><strong>Results: </strong>The top two most frequently aberrant target oncogenes were <i>EGFR</i> (48.06%) and <i>KRAS</i> (9.51%). These were followed by <i>ALK</i> (5.41%), <i>HER2</i> (2.35%), <i>MET</i> (2.23%), <i>RET</i> (2.11%), <i>ROS1</i> (1.88%), <i>BRAF</i> (0.47%), <i>NRAS</i> (0.24%), and <i>PIK3CA</i> (0.12%). Additionally, 11 (1.29%) patients had synchronous gene alterations in two genes. The main <i>EGFR</i> mutations were exon 21 L858R and exon 19-Del, which accounted for 45.97% and 42.79% of all <i>EGFR</i> mutations, respectively. Logistic regression analysis showed that the frequency of <i>EGFR</i> mutations was positively correlated with women, non-smokers, lung adenocarcinoma, and invasive non-mucinous adenocarcinoma (IA), and negatively correlated with solid nodule, micro-invasive adenocarcinoma, and solid-predominant adenocarcinoma. <i>KRAS</i> mutations were positively associated with men and longer tumor long diameters and negatively correlated with lung adenocarcinoma (<i>P < 0.05</i> for all).</p><p><strong>Conclusion: </strong>Our findings suggest that the <i>EGFR</i> mutation frequency was higher in women, non-smokers, lung adenocarcinoma, and the IA subtype in lung adenocarcinoma patients, while the <i>KRAS</i> mutation rate was higher in men and patients with longer tumor long diameter and lower in lung adenocarcinoma patients.</p>\",\"PeriodicalId\":12750,\"journal\":{\"name\":\"Frontiers in Genetics\",\"volume\":null,\"pages\":null},\"PeriodicalIF\":2.8000,\"publicationDate\":\"2024-09-19\",\"publicationTypes\":\"Journal Article\",\"fieldsOfStudy\":null,\"isOpenAccess\":false,\"openAccessPdf\":\"https://www.ncbi.nlm.nih.gov/pmc/articles/PMC11446855/pdf/\",\"citationCount\":\"0\",\"resultStr\":null,\"platform\":\"Semanticscholar\",\"paperid\":null,\"PeriodicalName\":\"Frontiers in Genetics\",\"FirstCategoryId\":\"99\",\"ListUrlMain\":\"https://doi.org/10.3389/fgene.2024.1455502\",\"RegionNum\":3,\"RegionCategory\":\"生物学\",\"ArticlePicture\":[],\"TitleCN\":null,\"AbstractTextCN\":null,\"PMCID\":null,\"EPubDate\":\"2024/1/1 0:00:00\",\"PubModel\":\"eCollection\",\"JCR\":\"Q2\",\"JCRName\":\"GENETICS & HEREDITY\",\"Score\":null,\"Total\":0}","platform":"Semanticscholar","paperid":null,"PeriodicalName":"Frontiers in Genetics","FirstCategoryId":"99","ListUrlMain":"https://doi.org/10.3389/fgene.2024.1455502","RegionNum":3,"RegionCategory":"生物学","ArticlePicture":[],"TitleCN":null,"AbstractTextCN":null,"PMCID":null,"EPubDate":"2024/1/1 0:00:00","PubModel":"eCollection","JCR":"Q2","JCRName":"GENETICS & HEREDITY","Score":null,"Total":0}
Driver gene alterations in NSCLC patients in southern China and their correlation with clinicopathologic characteristics.
Introduction: In this study, we aimed to explore the relationship between clinicopathological features and driver gene changes in Chinese NSCLC patients.
Methods: Amplification refractory mutation system PCR was used to detect the aberrations of 10 driver oncogenes in 851 Chinese NSCLC patients, and their correlation with clinicopathological characteristics was also analyzed. Moreover, three models of logistic regression were used to analyze the association between histopathology and EGFR or KRAS mutations.
Results: The top two most frequently aberrant target oncogenes were EGFR (48.06%) and KRAS (9.51%). These were followed by ALK (5.41%), HER2 (2.35%), MET (2.23%), RET (2.11%), ROS1 (1.88%), BRAF (0.47%), NRAS (0.24%), and PIK3CA (0.12%). Additionally, 11 (1.29%) patients had synchronous gene alterations in two genes. The main EGFR mutations were exon 21 L858R and exon 19-Del, which accounted for 45.97% and 42.79% of all EGFR mutations, respectively. Logistic regression analysis showed that the frequency of EGFR mutations was positively correlated with women, non-smokers, lung adenocarcinoma, and invasive non-mucinous adenocarcinoma (IA), and negatively correlated with solid nodule, micro-invasive adenocarcinoma, and solid-predominant adenocarcinoma. KRAS mutations were positively associated with men and longer tumor long diameters and negatively correlated with lung adenocarcinoma (P < 0.05 for all).
Conclusion: Our findings suggest that the EGFR mutation frequency was higher in women, non-smokers, lung adenocarcinoma, and the IA subtype in lung adenocarcinoma patients, while the KRAS mutation rate was higher in men and patients with longer tumor long diameter and lower in lung adenocarcinoma patients.
Frontiers in GeneticsBiochemistry, Genetics and Molecular Biology-Molecular Medicine
CiteScore
5.50
自引率
8.10%
发文量
3491
审稿时长
14 weeks
期刊介绍:
Frontiers in Genetics publishes rigorously peer-reviewed research on genes and genomes relating to all the domains of life, from humans to plants to livestock and other model organisms. Led by an outstanding Editorial Board of the world’s leading experts, this multidisciplinary, open-access journal is at the forefront of communicating cutting-edge research to researchers, academics, clinicians, policy makers and the public.
The study of inheritance and the impact of the genome on various biological processes is well documented. However, the majority of discoveries are still to come. A new era is seeing major developments in the function and variability of the genome, the use of genetic and genomic tools and the analysis of the genetic basis of various biological phenomena.