COVID-19 大流行期间和放宽 COVID-19 限制后急性呼吸道感染患者的呼吸道病原体流行病学。

IF 3.7 2区 生物学 Q2 MICROBIOLOGY
Microbiology spectrum Pub Date : 2024-11-05 Epub Date: 2024-09-25 DOI:10.1128/spectrum.01161-24
Pei Zhao, Yu Zhang, Jie Wang, Yonghui Li, Yuxin Wang, Yuan Gao, Mengchuan Zhao, Ming Zhao, He Tan, Yanqing Tie, ZhiShan Feng
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引用次数: 0

摘要

我们旨在研究2019年冠状病毒病(COVID-19)大流行期间(2021年1月-2022年12月)和COVID-19限制性措施放松后(2022年1月-2023年12月)中国石家庄市急性呼吸道感染(ARIs)患者中非严重急性呼吸综合征冠状病毒2(SARS-CoV-2)呼吸道病原体的流行病学特征。这项回顾性研究纳入了2021年至2023年期间在河北省总医院就诊的6633名ARIs患者。研究人员采集了鼻咽拭子样本,对 13 种常见呼吸道病原体进行多重 PCR 检测。31.58%的急性呼吸道感染患者被检测出呼吸道病原体,8.5%的急性呼吸道感染患者合并多种病原体感染。在 COVID-19 大流行期间,2021 年和 2022 年分别有 326 人(27.63%)和 283 人(24.38%)的呼吸道病原体呈阳性。然而,在 COVID-19 限制放宽后的 2023 年,阳性率大幅上升至 34.62%,共发现 4292 个病例。过去三年3 的阳性病例大多集中在 14 岁以下的患者中。发现的主要病原体是 2021 年的人类鼻病毒(HRVs)(15.08%)、2022 年的肺炎支原体(MP)(6.46%)和 2023 年的甲型流感病毒(FluA)(11.35%)。除副流感病毒(PIV)外,大多数病原体的季节流行模式都受到了影响。与 2021 年和 2022 年相比,2023 年流感病毒(FluA)和腺病毒(ADV)I 的阳性病例和阳性率同时上升。此外,2023 年呼吸道合胞病毒 (RSV)、MP 和冠状病毒 (CoV) 的感染率超过或与 2021 年和 2022 年相当。相反,与 2021 年或 2022 年相比,2023 年的 PIV、RV、偏肺病毒(MPV)和乙型流感病毒(FluB)阳性率较低:在 2019 年冠状病毒病(COVID-19)大流行期间实施严格的非药物干预措施(NPIs)可能会导致呼吸道病原体的流行病学特征发生变化,以及免疫债务的发生,从而有可能在放松严格的 NPIs 措施后导致呼吸道病原体活动的恢复。关于 COVID-19 大流行期间和 COVID-19 限制放宽后各年龄段急性呼吸道感染(ARI)患者中呼吸道病原体流行病学特征的报道十分有限。我们的研究调查了 2021 年 1 月至 2023 年 12 月期间中国石家庄 13 种呼吸道病原体的流行病学。这些数据对于持续监测 COVID-19 大流行期间和之后呼吸道病原体的流行病学变化至关重要,并为急性呼吸道感染的预防和管理提供了科学依据。
本文章由计算机程序翻译,如有差异,请以英文原文为准。
Epidemiology of respiratory pathogens in patients with acute respiratory infections during the COVID-19 pandemic and after easing of COVID-19 restrictions.

We aimed to investigate the epidemiological characteristics of non-severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) respiratory pathogens among patients with acute respiratory infections (ARIs) in Shijiazhuang, China, during the coronavirus disease 2019 (COVID-19) pandemic (January 2021--December 2022) and after the relaxation of COVID-19 restrictive measures (January 2022--December 2023). This retrospective study enrolled 6,633 ARIs patients who visited the Hebei General Hospital between 2021- and 2023. Nasopharyngeal swabs samples were collected for multiplex PCR detection of 13 common respiratory pathogens. Respiratory pathogens were detected in 31.58% of individuals diagnosed with ARIs, whileereas a co-infection with multiple pathogens was observed in 8.5% of the ARI patients. In the years 2021 and 2022, 326 (27.63%) and 283 (24.38%) respiratory pathogens were found to be positive, respectively, during the COVID-19 pandemic. However, in 2023, subsequent to the easing of COVID-19 restrictions, the positivity rate significantly rose to 34.62%, with 4,292 cases identified. The majority of positive cases over the last three3 years were concentrated in patients under 14 years old. The predominant pathogens identified were human rhinovirus (HRVs) (15.08%) in 2021, mycoplasma pneumonia (MP) (6.46%) in 2022, and influenza A virus (FluA) (11.35%) in 2023. Seasonal prevalence patterns of most pathogens were affected, except for parainfluenza virus (PIV). There was a simultaneous increase in the positive cases and positivity rates of FluA and adenovirus (ADV) Iin 2023, compared to 2021 and 2022. Additionally, the infection rates of respiratory syncytial virus (RSV), MP, and coronavirus (CoV) in 2023 either exceeded or were comparable to those in 2021 and 2022. Conversely, the positivity rates of PIV, RVs, metapneumovirus (MPV), and influenza B virus (FluB) were lower in 2023 compared to 2021 or 2022.

Importance: The implementation of strict non-pharmaceutical interventions (NPIs) during the coronavirus disease 2019 (COVID-19) pandemic may lead to changes in the epidemiological features of respiratory pathogens, as well as the occurrence of immune debt, potentially causing a resurgence in respiratory pathogen activity following the easing of strict NPIs measures. There are limited reports on the epidemiological characteristics of respiratory pathogens among patients of all ages with acute respiratory infections (ARIs) during the COVID-19 pandemic and after the easing of COVID-19 restrictions. Our study investigated the epidemiology of 13 respiratory pathogens in Shijiazhuang, China, from January 2021 to December 2023. Thisese data isare crucial for the ongoing surveillance of epidemiological shifts in respiratory pathogens during and post the -COVID-19 pandemic, and serves as a scientific foundation for the prevention and management of ARIs.

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来源期刊
Microbiology spectrum
Microbiology spectrum Biochemistry, Genetics and Molecular Biology-Genetics
CiteScore
3.20
自引率
5.40%
发文量
1800
期刊介绍: Microbiology Spectrum publishes commissioned review articles on topics in microbiology representing ten content areas: Archaea; Food Microbiology; Bacterial Genetics, Cell Biology, and Physiology; Clinical Microbiology; Environmental Microbiology and Ecology; Eukaryotic Microbes; Genomics, Computational, and Synthetic Microbiology; Immunology; Pathogenesis; and Virology. Reviews are interrelated, with each review linking to other related content. A large board of Microbiology Spectrum editors aids in the development of topics for potential reviews and in the identification of an editor, or editors, who shepherd each collection.
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